RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 SYT1P21579 422 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 FGFR3P22607 806 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 TARSP26639 723 aaKnown RBP21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 ARHGAP8P85298 464 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 LMNB2Q03252 620 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 ECM1Q16610 540 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 MAPK6Q16659 721 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 NELL1Q92832 810 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 MCRS1Q96EZ8 462 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 CDY1Q9Y6F8 540 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 CACNA1IQ9P0X4 2223 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 TTLL13PA6NNM8 815 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 TMEM189-UBE2V1I3L0A0 370 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 TRAPPC3O43617 180 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 TBC1D4O60343 1298 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 LILRB5O75023 590 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 ATXN1P54253 815 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 ADCY1Q08828 1119 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 CNTNAP3BQ96NU0 1288 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 FAM126AQ9BYI3 521 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 CNTNAP3Q9BZ76 1288 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 CXCL16Q9H2A7 254 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 DAXXQ9UER7 740 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 CDV3Q9UKY7 258 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 DNM3Q9UQ16 869 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 BACE2Q9Y5Z0 518 aa21.04■□□□□ 0.96
TRAPPC3-204ENST00000373166 RHOP08100 348 aa21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 CDC25AP30304 524 aa21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 ZRSR1Q15695 479 aaKnown RBP21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 TSSK4Q6SA08 328 aa21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 ANKS3Q6ZW76 656 aa21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 CDK5RAP3Q96JB5 506 aa21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 AVENQ9NQS1 362 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 HEBP1Q9NRV9 189 aa21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 GDAQ9Y2T3 454 aa21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 FANCMQ8IYD8 2048 aa21.03■□□□□ 0.96
TRAPPC3-204ENST00000373166 E9PMD0 336 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 ACKR2O00590 384 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 PRKCBP05771 671 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 HSP90AA1P07900 732 aaKnown RBP21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 PTPN2P17706 415 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 LIG1P18858 919 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 PPP2R5AQ15172 486 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 SF3A1Q15459 793 aaKnown RBP21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 ELSPBP1Q96BH3 223 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 AK8Q96MA6 479 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 UROC1Q96N76 676 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 MMTAG2Q9BU76 263 aaKnown RBP21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 PLA2G2FQ9BZM2 168 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 PRMT8Q9NR22 394 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 USP18Q9UMW8 372 aa21.02■□□□□ 0.96
TRAPPC3-204ENST00000373166 COL4A3Q01955 1670 aa21.02■□□□□ 0.95
TRAPPC3-204ENST00000373166 LRG1P02750 347 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 ELF1P32519 619 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 CLCNKBP51801 687 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 MTAPQ13126 283 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 RESTQ13127 1097 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 SLC5A9Q2M3M2 681 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 DCAF4L1Q3SXM0 396 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 TANGO2Q6ICL3 276 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 KCTD17Q8N5Z5 321 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 DEPTORQ8TB45 409 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 KIFAP3Q92845 792 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 DNASE1L2Q92874 299 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 IFT74Q96LB3 600 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 GMEB2Q9UKD1 530 aa21.01■□□□□ 0.95
TRAPPC3-204ENST00000373166 MYH15Q9Y2K3 1946 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 MAN2B1O00754 1011 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 STX6O43752 255 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 TKTP29401 623 aaKnown RBP21■□□□□ 0.95
TRAPPC3-204ENST00000373166 NAMPTP43490 491 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 NRLP54845 237 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 FZD5Q13467 585 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 PPP2R5DQ14738 602 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 UPP1Q16831 310 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 HYIQ5T013 277 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 ZNF461Q8TAF7 563 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 BSNDQ8WZ55 320 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 DDX27Q96GQ7 796 aaKnown RBP21■□□□□ 0.95
TRAPPC3-204ENST00000373166 PPP1R10Q96QC0 940 aaKnown RBP21■□□□□ 0.95
TRAPPC3-204ENST00000373166 RTKNQ9BST9 563 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 CCDC113Q9H0I3 377 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 MTMR6Q9Y217 621 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 USP20Q9Y2K6 914 aa21■□□□□ 0.95
TRAPPC3-204ENST00000373166 ARHGEF37A1IGU5 675 aa20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 PRRG1O14668 218 aa20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 SLC26A4O43511 780 aa20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 CEBPBP17676 345 aa20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 IGFBP6P24592 240 aaPredicted RBP20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 GLRA4Q5JXX5 417 aa20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 EEF1DP3Q658K8 133 aa20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 APBB1IPQ7Z5R6 666 aaPredicted RBP20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 BRD9Q9H8M2 597 aa20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 ZFP14Q9HCL3 533 aa20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 RAB23Q9ULC3 237 aa20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 NDRG2Q9UN36 371 aaKnown RBP20.99■□□□□ 0.95
TRAPPC3-204ENST00000373166 MIA3Q5JRA6 1907 aa20.98■□□□□ 0.95
TRAPPC3-204ENST00000373166 ZNF197O14709 1029 aa20.98■□□□□ 0.95
TRAPPC3-204ENST00000373166 LONP1P36776 959 aaKnown RBP20.98■□□□□ 0.95
TRAPPC3-204ENST00000373166 UBA7P41226 1012 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms