RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 STK32AQ8WU08 396 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 RBM15Q96T37 977 aaKnown RBP eCLIP14.56□□□□□ -0.08
USP49-201ENST00000373006 UNC45AQ9H3U1 944 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 HSPBP1Q9NZL4 362 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 ZBTB21Q9ULJ3 1066 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 ADGRA3Q8IWK6 1321 aa14.56□□□□□ -0.08
USP49-201ENST00000373006 EXOC1LA0A1B0GW35 172 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 ADRA2BP18089 450 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 KRT15P19012 456 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 PRELPP51888 382 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 GSTA5Q7RTV2 222 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 ATL2Q8NHH9 583 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 SLCO2A1Q92959 643 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 GRAMD1AQ96CP6 724 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 SLC7A6OSQ96CW6 309 aaPredicted RBP14.55□□□□□ -0.08
USP49-201ENST00000373006 RBM17Q96I25 401 aaKnown RBP14.55□□□□□ -0.08
USP49-201ENST00000373006 CCDC17Q96LX7 622 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 CYP39A1Q9NYL5 469 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 UTRNP46939 3433 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 SMCHD1A6NHR9 2005 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 COL5A3P25940 1745 aaPredicted RBP14.55□□□□□ -0.08
USP49-201ENST00000373006 MAPK13O15264 365 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 PIAS1O75925 651 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 ASMTLO95671 621 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 CYP3A4P08684 503 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 RPA3P35244 121 aaPredicted RBP14.55□□□□□ -0.08
USP49-201ENST00000373006 PKN2Q16513 984 aaKnown RBP14.55□□□□□ -0.08
USP49-201ENST00000373006 APOBEC3HQ6NTF7 200 aaKnown RBP14.55□□□□□ -0.08
USP49-201ENST00000373006 SLC9A9Q8IVB4 645 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 CPA5Q8WXQ8 436 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 MKL1Q969V6 931 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 UVRAGQ9P2Y5 699 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 LGALS13Q9UHV8 139 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 LRRC42Q9Y546 428 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 USH1CQ9Y6N9 552 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 SPDYE5A6NIY4 337 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 MAP3K13O43283 966 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 KRT5P13647 590 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 MAGEA4P43358 317 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 PTDSS1P48651 473 aaKnown RBP14.55□□□□□ -0.08
USP49-201ENST00000373006 CCDC15Q0P6D6 951 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 PADI6Q6TGC4 694 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 XXYLT1Q8NBI6 393 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 MAML1Q92585 1016 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 ZNF577Q9BSK1 485 aa14.55□□□□□ -0.08
USP49-201ENST00000373006 DENND2DQ9H6A0 471 aaPredicted RBP14.55□□□□□ -0.08
USP49-201ENST00000373006 MYH11P35749 1972 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 WDR91A4D1P6 747 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 NEFHP12036 1026 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 YARSP54577 528 aaKnown RBP14.54□□□□□ -0.08
USP49-201ENST00000373006 PARP6Q2NL67 630 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 P3H1Q32P28 736 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 TAF1BQ53T94 588 aaPredicted RBP14.54□□□□□ -0.08
USP49-201ENST00000373006 CBWD2Q8IUF1 395 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 ZNF513Q8N8E2 541 aaPredicted RBP14.54□□□□□ -0.08
USP49-201ENST00000373006 SAYSD1Q9NPB0 183 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 PAPOLBQ9NRJ5 636 aaKnown RBP14.54□□□□□ -0.08
USP49-201ENST00000373006 TOPORSQ9NS56 1045 aaPredicted RBP14.54□□□□□ -0.08
USP49-201ENST00000373006 NYAP2Q9P242 653 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 STARD13Q9Y3M8 1113 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 SPATA31A6Q5VVP1 1343 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 TMEM150BA6NC51 233 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 TCEA3O75764 348 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 ADRB2P07550 413 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 PECAM1P16284 738 aaPredicted RBP14.54□□□□□ -0.08
USP49-201ENST00000373006 SSTR3P32745 418 aaPredicted RBP14.54□□□□□ -0.08
USP49-201ENST00000373006 MFAP3P55082 362 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 CDR2Q01850 454 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 STAT4Q14765 748 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 FASTKD3Q14CZ7 662 aaKnown RBP14.54□□□□□ -0.08
USP49-201ENST00000373006 CCDC174Q6PII3 467 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 AGGF1Q8N302 714 aaeCLIP14.54□□□□□ -0.08
USP49-201ENST00000373006 GLIS1Q8NBF1 620 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 TRABDQ9H4I3 376 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 DBNDD1Q9H9R9 158 aa14.54□□□□□ -0.08
USP49-201ENST00000373006 hCG_2014768A0A024R1R8 64 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 RGL2O15211 777 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 WFS1O76024 890 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 ZSCAN5DPP0CG00 497 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 CA4P22748 312 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 RPS6KA3P51812 740 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 PPP2R5CQ13362 524 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 MOGSQ13724 837 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 ACAD10Q6JQN1 1059 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 TRABD2AQ86V40 505 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 GRK7Q8WTQ7 553 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 SHC3Q92529 594 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 SYT15Q9BQS2 421 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 PI4K2AQ9BTU6 479 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 STRA6Q9BX79 667 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 MOV10L1Q9BXT6 1211 aaKnown RBP14.53□□□□□ -0.08
USP49-201ENST00000373006 KIAA1586Q9HCI6 787 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 KLHL11Q9NVR0 708 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 UBE4BO95155 1302 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 SORBS3O60504 671 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 FGFR1P11362 822 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 GCAP28676 217 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 CNGA1P29973 690 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 ALDH3A1P30838 453 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 JAG1P78504 1218 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms