RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 HVCN1Q96D96 273 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.3■□□□□ 0.36
C9orf78-201ENST00000372447 ENC1O14682 589 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 H2AFXP16104 143 aaPredicted RBP17.3■□□□□ 0.36
C9orf78-201ENST00000372447 BFSP1Q12934 665 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 ATF7IP2Q5U623 682 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 PAPD7Q5XG87 772 aaKnown RBP17.3■□□□□ 0.36
C9orf78-201ENST00000372447 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 PSRC1Q6PGN9 363 aaPredicted RBP17.3■□□□□ 0.36
C9orf78-201ENST00000372447 TSPYL2Q9H2G4 693 aaPredicted RBP17.3■□□□□ 0.36
C9orf78-201ENST00000372447 PDZD7Q9H5P4 517 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 PTPRHQ9HD43 1115 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 RGS18Q9NS28 235 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
C9orf78-201ENST00000372447 TNFSF13BQ9Y275 285 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 BZW2Q9Y6E2 419 aaKnown RBP17.3■□□□□ 0.36
C9orf78-201ENST00000372447 ABHD14A-ACY1A0A1B0GW23 586 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 ANO9A1A5B4 782 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 TISP43B9A030 160 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 HNRNPDLO14979 420 aaKnown RBP17.29■□□□□ 0.36
C9orf78-201ENST00000372447 PIGRP01833 764 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 ATP1A1P05023 1023 aaKnown RBP17.29■□□□□ 0.36
C9orf78-201ENST00000372447 SLC18A3Q16572 532 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 TMEM132AQ24JP5 1023 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 TEX35Q5T0J7 233 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 UBXN11Q5T124 520 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 EEF1DP3Q658K8 133 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 TWF2Q6IBS0 349 aaKnown RBP17.29■□□□□ 0.36
C9orf78-201ENST00000372447 SLC39A4Q6P5W5 647 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 ZPBP2Q6X784 338 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 IRF2BP2Q7Z5L9 587 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 GPR161Q8N6U8 529 aaKnown RBP17.29■□□□□ 0.36
C9orf78-201ENST00000372447 TRIM58Q8NG06 486 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 RABGGTAQ92696 567 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 BICD1Q96G01 975 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 ZBTB45Q96K62 511 aaPredicted RBP17.29■□□□□ 0.36
C9orf78-201ENST00000372447 PCIF1Q9H4Z3 704 aa17.29■□□□□ 0.36
C9orf78-201ENST00000372447 LUC7LQ9NQ29 371 aaKnown RBP17.29■□□□□ 0.36
C9orf78-201ENST00000372447 ANKRD63C9JTQ0 380 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 TACC1O75410 805 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 TRIM49P0CI25 452 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 TRIM49CP0CI26 452 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 KRT13P13646 458 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 PROZP22891 400 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 JAM2P57087 298 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 CBWD6Q4V339 395 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 CBWD3Q5JTY5 395 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 CBWD5Q5RIA9 395 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 C9orf50Q5SZB4 431 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 SLC27A1Q6PCB7 646 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.28■□□□□ 0.368e-7■□□□□ 9.2
C9orf78-201ENST00000372447 FAM43BQ6ZT52 329 aaPredicted RBP17.28■□□□□ 0.36
C9orf78-201ENST00000372447 INTS8Q75QN2 995 aaKnown RBP17.28■□□□□ 0.36
C9orf78-201ENST00000372447 RDH13Q8NBN7 331 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 CBWD1Q9BRT8 395 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.28■□□□□ 0.36
C9orf78-201ENST00000372447 EIF2AQ9BY44 585 aaKnown RBP17.28■□□□□ 0.36
C9orf78-201ENST00000372447 UBE2OQ9C0C9 1292 aaKnown RBP17.28■□□□□ 0.36
C9orf78-201ENST00000372447 CXXC1Q9P0U4 656 aaPredicted RBP17.28■□□□□ 0.36
C9orf78-201ENST00000372447 EXOC7Q9UPT5 735 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 SAR1BQ9Y6B6 198 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 C9IYK1 514 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 ABLIM1O14639 778 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 TOM1L1O75674 476 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 BAIAP3O94812 1187 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 LIG4P49917 911 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 TUBB4BP68371 445 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 ENOX2Q16206 610 aaKnown RBP17.28■□□□□ 0.36
C9orf78-201ENST00000372447 IQCEQ6IPM2 695 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 SLC24A5Q71RS6 500 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 XXYLT1Q8NBI6 393 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 HERVK_113Q902F9 699 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 CCDC94Q9BW85 323 aaPredicted RBP17.28■□□□□ 0.36
C9orf78-201ENST00000372447 TRAIPQ9BWF2 469 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 HAPLN2Q9GZV7 340 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 HSPBP1Q9NZL4 362 aa17.28■□□□□ 0.36
C9orf78-201ENST00000372447 AJAP1Q9UKB5 411 aaPredicted RBP17.28■□□□□ 0.36
C9orf78-201ENST00000372447 A0A087X0T9 212 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 A0A0U1RQF3 1178 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 ZBBXA8MT70 800 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 MAPK13O15264 365 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 FAM228BP0C875 321 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 PRKCIP41743 596 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 WDR5P61964 334 aaKnown RBP17.27■□□□□ 0.35
C9orf78-201ENST00000372447 SHHQ15465 462 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 TCHPQ9BT92 498 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 FAM105AQ9NUU6 356 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 ANKFY1Q9P2R3 1169 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 ADAMTS1Q9UHI8 967 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 JRKLQ9Y4A0 524 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 CAPN6Q9Y6Q1 641 aa17.27■□□□□ 0.35
C9orf78-201ENST00000372447 CLDN3O15551 220 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 EFCAB14O75071 495 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 MOCS3O95396 460 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 NPTXRO95502 500 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 ADSSP30520 456 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 VAMP7P51809 220 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 FAM189BP81408 668 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 MYL7Q01449 175 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 PTK2Q05397 1052 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms