RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 KRT5P13647 590 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 ELNP15502 786 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 CCND3P30281 292 aaPredicted RBP18.83■□□□□ 0.6
SSBP3-203ENST00000371319 NAP1L1P55209 391 aaKnown RBP18.83■□□□□ 0.6
SSBP3-203ENST00000371319 MYL6P60660 151 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 CDR2Q01850 454 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 WHAMMP3Q1A5X7 153 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 SLC10A6Q3KNW5 377 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 CD99L2Q8TCZ2 262 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 ANKRD36BP1Q96IX9 119 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 SRRDQ9UH36 339 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 CNTN6Q9UQ52 1028 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 GINS2Q9Y248 185 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 THSD7BQ9C0I4 1608 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 GRID2IPA4D2P6 1211 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 TRPA1O75762 1119 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 CALCAP01258 141 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 GNAT1P11488 350 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 TBXAS1P24557 533 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-203ENST00000371319 GRM5P41594 1212 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 PDE6CP51160 858 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 PCBP1Q15365 356 aaKnown RBP eCLIP18.82■□□□□ 0.61e-6■■■■□ 22.1
SSBP3-203ENST00000371319 DCAF4L1Q3SXM0 396 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 CXCL17Q6UXB2 119 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 CATSPER4Q7RTX7 472 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 ISCUQ9H1K1 167 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 SAR1BQ9Y6B6 198 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 MROH7Q68CQ1 1323 aa18.82■□□□□ 0.6
SSBP3-203ENST00000371319 NPTXRO95502 500 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 PRKAR2AP13861 404 aaKnown RBP18.81■□□□□ 0.6
SSBP3-203ENST00000371319 SNX17Q15036 470 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 SGSM1Q2NKQ1 1148 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 NBPF20Q3BBV1 942 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 JADE1Q6IE81 842 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 TMEM130Q8N3G9 435 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 NME8Q8N427 588 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 TMEM40Q8WWA1 233 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 ADPGKQ9BRR6 497 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 XYLT2Q9H1B5 865 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 ASB7Q9H672 318 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 SPC25Q9HBM1 224 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 SIX4Q9UIU6 781 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 SNX12Q9UMY4 172 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 CITO14578 2027 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 ANKRD62A6NC57 917 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 NCK2O43639 380 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 SRGAP2O75044 1071 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 RTN2O75298 545 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 EIF4BP23588 611 aaKnown RBP18.81■□□□□ 0.6
SSBP3-203ENST00000371319 TRPC3Q13507 836 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 ZNF710Q8N1W2 664 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 CEP112Q8N8E3 955 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 KLHDC9Q8NEP7 349 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 TPCN2Q8NHX9 752 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 CXorf38Q8TB03 319 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 ARHGEF26Q96DR7 871 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 ACAP3Q96P50 834 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 TLR10Q9BXR5 811 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 IMPG2Q9BZV3 1241 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 XPNPEP3Q9NQH7 507 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 GTF2IRD1Q9UHL9 959 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 PCDHB4Q9Y5E5 795 aa18.81■□□□□ 0.6
SSBP3-203ENST00000371319 EFCAB8A8MWE9 144 aa18.8■□□□□ 0.6
SSBP3-203ENST00000371319 GZMAP12544 262 aa18.8■□□□□ 0.6
SSBP3-203ENST00000371319 PRLRP16471 622 aa18.8■□□□□ 0.6
SSBP3-203ENST00000371319 CRYBB1P53674 252 aaPredicted RBP18.8■□□□□ 0.6
SSBP3-203ENST00000371319 SLC27A1Q6PCB7 646 aa18.8■□□□□ 0.6
SSBP3-203ENST00000371319 RSRC2Q7L4I2 434 aaKnown RBP18.8■□□□□ 0.6
SSBP3-203ENST00000371319 C1orf127Q8N9H9 656 aa18.8■□□□□ 0.6
SSBP3-203ENST00000371319 LRRC57Q8N9N7 239 aa18.8■□□□□ 0.6
SSBP3-203ENST00000371319 ANKRD7Q92527 254 aa18.8■□□□□ 0.6
SSBP3-203ENST00000371319 EIF2AQ9BY44 585 aaKnown RBP18.8■□□□□ 0.6
SSBP3-203ENST00000371319 NIF3L1Q9GZT8 377 aa18.8■□□□□ 0.6
SSBP3-203ENST00000371319 THAP2Q9H0W7 228 aa18.8■□□□□ 0.6
SSBP3-203ENST00000371319 FTLP02792 175 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-203ENST00000371319 ABCB4P21439 1286 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 AXLP30530 894 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 MAP2K2P36507 400 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 NOP2P46087 812 aaKnown RBP18.79■□□□□ 0.6
SSBP3-203ENST00000371319 VEGFBP49765 207 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 ZNF132P52740 706 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 BPIFB4P59827 614 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 ELF2Q15723 593 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 IFI16Q16666 785 aaKnown RBP18.79■□□□□ 0.6
SSBP3-203ENST00000371319 ERCC6LQ2NKX8 1250 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 ZNF699Q32M78 642 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 MAP3K21Q5TCX8 1036 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 MEI1Q5TIA1 1274 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 CCSAPQ6IQ19 270 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-203ENST00000371319 GDF6Q6KF10 455 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-203ENST00000371319 NOTUMQ6P988 496 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 ZNF677Q86XU0 584 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 RBBP8NLQ8NC74 664 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-203ENST00000371319 CTNNBL1Q8WYA6 563 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-203ENST00000371319 RFFLQ8WZ73 363 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 PUF60Q9UHX1 559 aaKnown RBP18.79■□□□□ 0.6
SSBP3-203ENST00000371319 PCDHB2Q9Y5E7 798 aa18.79■□□□□ 0.6
SSBP3-203ENST00000371319 PDCD11Q14690 1871 aaKnown RBP18.78■□□□□ 0.6
SSBP3-203ENST00000371319 FAM170AA1A519 330 aa18.78■□□□□ 0.6
SSBP3-203ENST00000371319 FTCDO95954 541 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms