RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 SWSAP1Q6NVH7 229 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 AGGF1Q8N302 714 aaeCLIP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 RAB42Q8N4Z0 105 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 PTPRN2Q92932 1015 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 SLC40A1Q9NP59 571 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 STAP1Q9ULZ2 295 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 ADGRG1Q9Y653 693 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 FCER1AP12319 257 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 CRKLP46109 303 aaKnown RBP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 BTBD8Q5XKL5 378 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 URGCPQ8TCY9 931 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 POLR3FQ9H1D9 316 aaPredicted RBP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 NEDD4P46934 1319 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 ANO9A1A5B4 782 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 PPP1R37O75864 691 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 AKR1B1P15121 316 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 CTCFP49711 727 aaPredicted RBP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 RGS7P49802 495 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 NME5P56597 212 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 DHX34Q14147 1143 aaKnown RBP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 SPRTNQ9H040 489 aaPredicted RBP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 PIH1D3Q9NQM4 214 aaKnown RBP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 CUL7Q14999 1698 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 ALBP02768 609 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 CAPN1P07384 714 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 CCND1P24385 295 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 SCFD1Q8WVM8 642 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 KLHL31Q9H511 634 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 TMEM191CA6NGB0 347 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 hCG_1984214I3L0E3 225 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 FOXN1O15353 648 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 RALBP11234 206 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 PTK7Q13308 1070 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 MEI1Q5TIA1 1274 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 HS6ST3Q8IZP7 471 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 ZNF713Q8N859 430 aaPredicted RBP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 SHCBP1Q8NEM2 672 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 SLC35G2Q8TBE7 412 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 C9orf72Q96LT7 481 aa11.65□□□□□ -0.54
COL11A1-203ENST00000370096 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
COL11A1-203ENST00000370096 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.55
COL11A1-203ENST00000370096 CIAO1O76071 339 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 FAM107AO95990 144 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 CPB1P15086 417 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 RFX3P48380 749 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 DSG1Q02413 1049 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 CHI3L2Q15782 390 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 ARL6IP4Q66PJ3 421 aaKnown RBP11.65□□□□□ -0.55
COL11A1-203ENST00000370096 NLRP10Q86W26 655 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 BBS7Q8IWZ6 715 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 HPS3Q969F9 1004 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 RAB6BQ9NRW1 208 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 PI4KBQ9UBF8 816 aa11.65□□□□□ -0.55
COL11A1-203ENST00000370096 MLNP12872 115 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 TBXAS1P24557 533 aaPredicted RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 NUP62P37198 522 aaPredicted RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 JAK3P52333 1124 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 ATP12AP54707 1039 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 CUL4AQ13619 759 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 LAMC2Q13753 1193 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 CYB5R4Q7L1T6 521 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 CNPY4Q8N129 248 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 IRX2Q9BZI1 471 aaPredicted RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 PLEKHA5Q9HAU0 1116 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 ZNF302Q9NR11 478 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 TJP2Q9UDY2 1190 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 KDM5AP29375 1690 aaKnown RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 HIST1H2AGP0C0S8 130 aaPredicted RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 HIST1H2ADP20671 130 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 PHKA2P46019 1235 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 PSMC6P62333 389 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 GPR141Q7Z602 305 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 VMP1Q96GC9 406 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 HIST1H2AHQ96KK5 128 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 HIST1H2AJQ99878 128 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 H2AFJQ9BTM1 129 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 STAP2Q9UGK3 403 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 KIAA0232Q92628 1395 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 ST13P50502 369 aaKnown RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 ZNF200P98182 395 aaPredicted RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 DGKHQ86XP1 1220 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 KCNK16Q96T55 309 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 AGPAT1Q99943 283 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 MYO3BQ8WXR4 1341 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 RHOBTB1O94844 696 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 TRADDQ15628 312 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 PCYOX1LQ8NBM8 494 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 NMD3Q96D46 503 aaKnown RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 RMDN3Q96TC7 470 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 ZC3H7BQ9UGR2 993 aaKnown RBP11.64□□□□□ -0.55
COL11A1-203ENST00000370096 NEU2Q9Y3R4 380 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 KIF21AQ7Z4S6 1674 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 NDUFS3O75489 264 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 SOX6P35712 828 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 SERPINB5P36952 375 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 NUDT2P50583 147 aa11.64□□□□□ -0.55
COL11A1-203ENST00000370096 NFIL3Q16649 462 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms