RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 FRMD5Q7Z6J6 570 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 SLC39A11Q8N1S5 342 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 ENOX1Q8TC92 643 aaKnown RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 C18orf25Q96B23 403 aaPredicted RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 EEF2KMTQ96G04 330 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 BORCS6Q96GS4 357 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 MED15Q96RN5 788 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 SRRTQ9BXP5 876 aaKnown RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 INTS13Q9NVM9 706 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 TUBGCP4Q9UGJ1 667 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 TULP1O00294 542 aaPredicted RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 CAVIN2O95810 425 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 TNNC2P02585 160 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 PAX3P23760 479 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 KRT17Q04695 432 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 C11orf57Q6ZUT1 292 aaPredicted RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 FBXO22Q8NEZ5 403 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 TMEM169Q96HH4 297 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 IGSF21Q96ID5 467 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 LRCH3Q96II8 777 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 BPIFA3Q9BQP9 254 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 DNAJC25Q9H1X3 360 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 GOLGA2P5Q9HBQ8 144 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 DPP3Q9NY33 737 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 ARMCX3Q9UH62 379 aaPredicted RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 ITGA11Q9UKX5 1188 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 LRRIQ3A6PVS8 624 aaPredicted RBP16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 H3BNC9 293 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 PODXLO00592 558 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 STX10O60499 249 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 FGF18O76093 207 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 CLCNKBP51801 687 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 MARSP56192 900 aaKnown RBP16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 UBE3AQ05086 875 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 CCDC40Q4G0X9 1142 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 ANO6Q4KMQ2 910 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 KLHL23Q8NBE8 558 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 ARNTL2Q8WYA1 636 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 THAP9Q9H5L6 903 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 LZTS1Q9Y250 596 aa16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 PRG3Q9Y2Y8 225 aaPredicted RBP16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 PDCD11Q14690 1871 aaKnown RBP16.8■□□□□ 0.28
PRPF38B-202ENST00000370022 TADA2AO75478 443 aa16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 B3GAT3O94766 335 aa16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 ANK1P16157 1881 aa16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 GTF2H1P32780 548 aa16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 PBX3P40426 434 aa16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 PLEKHO2Q8TD55 490 aa16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 PAAF1Q9BRP4 392 aa16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 MTMR12Q9C0I1 747 aa16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 PUF60Q9UHX1 559 aaKnown RBP16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 ADAM28Q9UKQ2 775 aa16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
PRPF38B-202ENST00000370022 SZT2Q5T011 3432 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 NT5C1B-RDH14C9J2C7 533 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 PIRO00625 290 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 TRAPPC3O43617 180 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 PNPLA4P41247 253 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 MYL5Q02045 173 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 ELAVL2Q12926 359 aaKnown RBP16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 C9orf57Q5W0N0 161 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 SPRED2Q7Z698 418 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 C1orf127Q8N9H9 656 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 OR5B17Q8NGF7 314 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 POP1Q99575 1024 aaKnown RBP16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 TTYH1Q9H313 450 aaPredicted RBP16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 CERS4Q9HA82 394 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 MARCH5Q9NX47 278 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 KIAA1671Q9BY89 1806 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 PTPRJQ12913 1337 aa16.78■□□□□ 0.28
PRPF38B-202ENST00000370022 KIF4AO95239 1232 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 ITGB1P05556 798 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 DLG4P78352 724 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 RBP5P82980 135 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 GPM6BQ13491 265 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 LMBRD2Q68DH5 695 aaPredicted RBP16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 TRAPPC11Q7Z392 1133 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 DDX53Q86TM3 631 aaKnown RBP16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 TMEM173Q86WV6 379 aaPredicted RBP16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 LRRC52Q8N7C0 313 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 LMAN2LQ9H0V9 348 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 NFE2L3Q9Y4A8 694 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 NUB1Q9Y5A7 615 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 NLRC5Q86WI3 1866 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 SF3B1O75533 1304 aaKnown RBP eCLIP16.77■□□□□ 0.281e-6■■■■■ 102.3
PRPF38B-202ENST00000370022 TRIP11Q15643 1979 aa16.77■□□□□ 0.28
PRPF38B-202ENST00000370022 SMTNL1A8MU46 457 aa16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 ITGB3P05106 788 aa16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 ZNF165P49910 485 aa16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 GUCY2FP51841 1108 aa16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 ZACNQ401N2 412 aa16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 DCAF17Q5H9S7 520 aaPredicted RBP16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 C1orf220Q5T0J3 134 aa16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.27
PRPF38B-202ENST00000370022 ZNF516Q92618 1163 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms