RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CHRDQ9H2X0 955 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 DNAAF2Q9NVR5 837 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 CLEC1BQ9P126 229 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 WDR35Q9P2L0 1181 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 CTNNAL1Q9UBT7 734 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 TMEM98Q9Y2Y6 226 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 PCDHB6Q9Y5E3 794 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 TNFRSF8P28908 595 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 PHEXP78562 749 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 COASYQ13057 564 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 SPECC1Q5M775 1068 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 SEPT14Q6ZU15 432 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 CELF4Q9BZC1 486 aaKnown RBP7.41□□□□□ -1.22
CSDE1-204ENST00000369530 SETD4Q9NVD3 440 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 CLIC4Q9Y696 253 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 KLRC4O43908 158 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 ATP6V1G2O95670 118 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 NAA35Q5VZE5 725 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 ZNF572Q7Z3I7 529 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-204ENST00000369530 NLRX1Q86UT6 975 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 ZNF410Q86VK4 478 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 DIS3L2Q8IYB7 885 aaKnown RBP7.41□□□□□ -1.22
CSDE1-204ENST00000369530 AENQ8WTP8 325 aaKnown RBP7.41□□□□□ -1.22
CSDE1-204ENST00000369530 NCSTNQ92542 709 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 ZNF570Q96NI8 536 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 SUGCTQ9HAC7 445 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 C6orf50Q9HD87 102 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 CHST7Q9NS84 486 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-204ENST00000369530 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-204ENST00000369530 TMEM150BA6NC51 233 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 ENO4A6NNW6 628 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 F8VZ95 297 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 BACH1O14867 736 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 TSPAN1O60635 241 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 ZNF202O95125 648 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 GSTA1P08263 222 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 GLRA2P23416 452 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 NLRP5P59047 1200 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 HEATR3Q7Z4Q2 680 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 FERMT2Q96AC1 680 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 RPGRIP1Q96KN7 1286 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 PLVAPQ9BX97 442 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 CCSER1Q9C0I3 900 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 CHST12Q9NRB3 414 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 CIDEBQ9UHD4 219 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 RCOR1Q9UKL0 485 aa7.41□□□□□ -1.22
CSDE1-204ENST00000369530 CBFA2T2O43439 604 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 GAS2O43903 313 aaKnown RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 PTENP60484 403 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 STIM1Q13586 685 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 CUL3Q13618 768 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 CAPSQ13938 189 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 ANKRD20A8PQ5CZ79 823 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 TMC6Q7Z403 805 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 CD302Q8IX05 232 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 ASAP3Q8TDY4 903 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 PPP1R13LQ8WUF5 828 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 MRPS27Q92552 414 aaKnown RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 YIPF2Q9BWQ6 316 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 RMI1Q9H9A7 625 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 TMCO1Q9UM00 188 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 BARX2Q9UMQ3 279 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 USP20Q9Y2K6 914 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 CTDP1Q9Y5B0 961 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 A0A0U1RQF3 1178 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 GRXCR1A8MXD5 290 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 WDR64B1ANS9 1081 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 NRG2O14511 850 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 EFCAB14O75071 495 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 DNAJB2P25686 324 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 GBP2P32456 591 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 CDR1P51861 262 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 NAPAP54920 295 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 NFIL3Q16649 462 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 BMT2Q1RMZ1 405 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 BEST2Q8NFU1 509 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 TRAPPC12Q8WVT3 735 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 PPP1R10Q96QC0 940 aaKnown RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 EIF2AK1Q9BQI3 630 aaKnown RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 DDX25Q9UHL0 483 aaKnown RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 ZMYND8Q9ULU4 1186 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-204ENST00000369530 TRPV2Q9Y5S1 764 aa7.4□□□□□ -1.22
CSDE1-204ENST00000369530 LOC730098B7Z3J9 87 aa7.4□□□□□ -1.23
CSDE1-204ENST00000369530 SKAP2O75563 359 aaPredicted RBP7.4□□□□□ -1.23
CSDE1-204ENST00000369530 FAM107AO95990 144 aa7.4□□□□□ -1.23
CSDE1-204ENST00000369530 PRKCEQ02156 737 aa7.4□□□□□ -1.23
CSDE1-204ENST00000369530 CLPPQ16740 277 aaPredicted RBP7.4□□□□□ -1.23
CSDE1-204ENST00000369530 GNPTABQ3T906 1256 aa7.4□□□□□ -1.23
CSDE1-204ENST00000369530 NT5DC1Q5TFE4 455 aa7.4□□□□□ -1.23
CSDE1-204ENST00000369530 AGMOQ6ZNB7 445 aa7.4□□□□□ -1.23
CSDE1-204ENST00000369530 EEPD1Q7L9B9 569 aa7.4□□□□□ -1.23
CSDE1-204ENST00000369530 SYT2Q8N9I0 419 aaPredicted RBP7.4□□□□□ -1.23
CSDE1-204ENST00000369530 KCNG4Q8TDN1 519 aa7.4□□□□□ -1.23
CSDE1-204ENST00000369530 ZNF473Q8WTR7 871 aaKnown RBP7.4□□□□□ -1.23
CSDE1-204ENST00000369530 ZFATQ9P243 1243 aa7.4□□□□□ -1.23
CSDE1-204ENST00000369530 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 HARSP12081 509 aaKnown RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 KRT2P35908 639 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms