RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 ANKS1BQ7Z6G8 1248 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 FBXO11Q86XK2 927 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 ANKRD35Q8N283 1001 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 AGGF1Q8N302 714 aaeCLIP13.06□□□□□ -0.32
PHGDH-201ENST00000369407 LRRC8CQ8TDW0 803 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-201ENST00000369407 FAM20AQ96MK3 541 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 AMNQ9BXJ7 453 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 NMRK1Q9NWW6 199 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 C2orf71A6NGG8 1288 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 GOLGA8SH3BPF8 625 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 GOLGA8MH3BSY2 632 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 LIN7AO14910 233 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-201ENST00000369407 KRT36O76013 467 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 WFS1O76024 890 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 KRT5P13647 590 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 CD58P19256 250 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 SREBF1P36956 1147 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 SKIV2L2P42285 1042 aaKnown RBP13.06□□□□□ -0.32
PHGDH-201ENST00000369407 MAGEA4P43358 317 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 MOGSQ13724 837 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 P3H1Q32P28 736 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 PLEKHG4Q58EX7 1191 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 C12orf50Q8NA57 414 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-201ENST00000369407 MAML1Q92585 1016 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 PI4K2AQ9BTU6 479 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 POLR3CQ9BUI4 534 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-201ENST00000369407 TMEM117Q9H0C3 514 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 VPS37BQ9H9H4 285 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 KIAA1586Q9HCI6 787 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 CYP3A4P08684 503 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 CYP11B1P15538 503 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 GCAP28676 217 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 YARSP54577 528 aaKnown RBP13.06□□□□□ -0.32
PHGDH-201ENST00000369407 KLC1Q07866 573 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 AP3B2Q13367 1082 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 ACVR2BQ13705 512 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 PTK6Q13882 451 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 RCN2Q14257 317 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 PARP6Q2NL67 630 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 ZFYVE27Q5T4F4 411 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 SYDE2Q5VT97 1194 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 ZFP69BQ9UJL9 534 aa13.06□□□□□ -0.32
PHGDH-201ENST00000369407 GAKO14976 1311 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 CFAP69A5D8W1 941 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 PI4K2BG5E9Z4 385 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 PLS3P13797 630 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 SP100P23497 879 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-201ENST00000369407 MXI1P50539 228 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 SCNN1BP51168 640 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 RCN1Q15293 331 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 PCNX4Q63HM2 1172 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 OTOAQ7RTW8 1153 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 CCDC125Q86Z20 511 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 DAW1Q8N136 415 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 TEX9Q8N6V9 391 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 RFWD2Q8NHY2 731 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 NRG4Q8WWG1 115 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 HAUS1Q96CS2 278 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 DDX50Q9BQ39 737 aaKnown RBP13.05□□□□□ -0.32
PHGDH-201ENST00000369407 CCDC77Q9BR77 488 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-201ENST00000369407 STARD13Q9Y3M8 1113 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 PLIN4Q96Q06 1357 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 A0A0G2JND7 137 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 CYP1A2P05177 515 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 NOP14P78316 857 aaKnown RBP13.05□□□□□ -0.32
PHGDH-201ENST00000369407 CCDC15Q0P6D6 951 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 CETN1Q12798 172 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 SPARCL1Q14515 664 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 HHATQ5VTY9 493 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 NLRP9Q7RTR0 991 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 TRABD2AQ86V40 505 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 ANKMY2Q8IV38 441 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 CERS5Q8N5B7 392 aa13.05□□□□□ -0.32
PHGDH-201ENST00000369407 TBX3O15119 743 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 NVLO15381 856 aaKnown RBP13.04□□□□□ -0.32
PHGDH-201ENST00000369407 GAS7O60861 476 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 FESP07332 822 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 KRT10P13645 584 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 ALDH3A1P30838 453 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 PIK3CAP42336 1068 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 KPNB1Q14974 876 aaKnown RBP13.04□□□□□ -0.32
PHGDH-201ENST00000369407 EFTUD2Q15029 972 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■■■□ 25.5
PHGDH-201ENST00000369407 TSNAXIP1Q2TAA8 658 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 TBC1D25Q3MII6 688 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 ZC3H18Q86VM9 953 aaKnown RBP13.04□□□□□ -0.32
PHGDH-201ENST00000369407 CBWD2Q8IUF1 395 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 FAM71AQ8IYT1 594 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 C10orf82Q8WW14 230 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 GRAMD1AQ96CP6 724 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 LGALS13Q9UHV8 139 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 CDK5RAP2Q96SN8 1893 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 NHSQ6T4R5 1651 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 F5H6K3 240 aa13.04□□□□□ -0.32
PHGDH-201ENST00000369407 EDF1O60869 148 aaKnown RBP13.04□□□□□ -0.32
PHGDH-201ENST00000369407 ADRB2P07550 413 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms