RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 SCN3BQ9NY72 215 aa16.55■□□□□ 0.24
PRDM1-203ENST00000369096 LIMA1Q9UHB6 759 aaKnown RBP16.55■□□□□ 0.24
PRDM1-203ENST00000369096 GGPS1O95749 300 aa16.55■□□□□ 0.24
PRDM1-203ENST00000369096 RALBP11234 206 aa16.55■□□□□ 0.24
PRDM1-203ENST00000369096 SPATA4Q8NEY3 305 aa16.55■□□□□ 0.24
PRDM1-203ENST00000369096 KIF12Q96FN5 646 aa16.55■□□□□ 0.24
PRDM1-203ENST00000369096 SMG5Q9UPR3 1016 aaKnown RBP16.55■□□□□ 0.24
PRDM1-203ENST00000369096 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
PRDM1-203ENST00000369096 P4HBP07237 508 aaKnown RBP16.54■□□□□ 0.24
PRDM1-203ENST00000369096 CENPAP49450 140 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 BYSLQ13895 437 aaKnown RBP16.54■□□□□ 0.24
PRDM1-203ENST00000369096 MAPRE1Q15691 268 aaKnown RBP16.54■□□□□ 0.24
PRDM1-203ENST00000369096 NUDT18Q6ZVK8 323 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 ENOSF1Q7L5Y1 443 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 PRUNE1Q86TP1 453 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 EFHBQ8N7U6 833 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 SHCBP1Q8NEM2 672 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 FAM162AQ96A26 154 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 CLMNQ96JQ2 1002 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 TRIM8Q9BZR9 551 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 KLHL11Q9NVR0 708 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 HOXC10Q9NYD6 342 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 SLC30A1Q9Y6M5 507 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 EMSYQ7Z589 1322 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 NDUFS3O75489 264 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 SRP72O76094 671 aaKnown RBP16.54■□□□□ 0.24
PRDM1-203ENST00000369096 KCNQ4P56696 695 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 IYDQ6PHW0 289 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 C4orf33Q8N1A6 199 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 POLR3FQ9H1D9 316 aaPredicted RBP16.54■□□□□ 0.24
PRDM1-203ENST00000369096 ARHGEF38Q9NXL2 777 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 SCP2P22307 547 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 UGP2Q16851 508 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 DUOXA2Q1HG44 320 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 STAG2Q8N3U4 1231 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 CCT7Q99832 543 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 RNF146Q9NTX7 359 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 MPP6Q9NZW5 540 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 ZHX2Q9Y6X8 837 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 STXBP3O00186 592 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 TEX33O43247 280 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 ATP1A1P05023 1023 aaKnown RBP16.54■□□□□ 0.24
PRDM1-203ENST00000369096 RAB14P61106 215 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 TXNRD1Q16881 649 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 SH3TC2Q8TF17 1288 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 DTNBP1Q96EV8 351 aa16.54■□□□□ 0.24
PRDM1-203ENST00000369096 ZC3H7BQ9UGR2 993 aaKnown RBP16.54■□□□□ 0.24
PRDM1-203ENST00000369096 C11orf74Q86VG3 221 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 KRT78Q8N1N4 520 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 PTPRN2Q92932 1015 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 MTERF3Q96E29 417 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 C9orf72Q96LT7 481 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 GPR101Q96P66 508 aaPredicted RBP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 SMAD5Q99717 465 aaKnown RBP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 TMEM47Q9BQJ4 181 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 TASP1Q9H6P5 420 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 V9GYQ6 96 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 EPB42P16452 691 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 SLC16A1P53985 500 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 CYLC2Q14093 348 aaPredicted RBP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 DDX53Q86TM3 631 aaKnown RBP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 HORMAD1Q86X24 394 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 USP33Q8TEY7 942 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 OLFML3Q9NRN5 406 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 CAND2O75155 1236 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 CDH16O75309 829 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 RASSF9O75901 435 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 CYBBP04839 570 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 GPSM2P81274 684 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 TAP1Q03518 808 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 PFKFB3Q16875 520 aaPredicted RBP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 CCDC81Q6ZN84 652 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 CYFIP1Q7L576 1253 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 AGGF1Q8N302 714 aaeCLIP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 TNIP3Q96KP6 325 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 ZNF560Q96MR9 790 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 RBM15Q96T37 977 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 RAB6BQ9NRW1 208 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 AGTP01019 485 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 SFNP31947 248 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 MLH1P40692 756 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 HPCAP84074 193 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 TTLL4Q14679 1199 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 TRIM71Q2Q1W2 868 aaKnown RBP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 ARHGAP17Q68EM7 881 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 TMEM154Q6P9G4 183 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 FGD2Q7Z6J4 655 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 YAF2Q8IY57 180 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 TSPAN17Q96FV3 270 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 FAM129AQ9BZQ8 928 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 BRD8Q9H0E9 1235 aa16.53■□□□□ 0.24
PRDM1-203ENST00000369096 AGO2Q9UKV8 859 aaKnown RBP16.53■□□□□ 0.24
PRDM1-203ENST00000369096 KRT16P08779 473 aa16.52■□□□□ 0.24
PRDM1-203ENST00000369096 CYP2D6P10635 497 aa16.52■□□□□ 0.24
PRDM1-203ENST00000369096 LMBRD2Q68DH5 695 aaPredicted RBP16.52■□□□□ 0.24
PRDM1-203ENST00000369096 ERP27Q96DN0 273 aa16.52■□□□□ 0.24
PRDM1-203ENST00000369096 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms