RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 NCSTNQ92542 709 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 GATA6Q92908 595 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 POP1Q99575 1024 aaKnown RBP11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 SSU72Q9NP77 194 aaKnown RBP11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 SEL1LQ9UBV2 794 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 GTF3C4Q9UKN8 822 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 ZNFX1Q9P2E3 1918 aaKnown RBP11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 FOXO6A8MYZ6 492 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 ATP9AO75110 1047 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 CBX6O95503 412 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 KCNA3P22001 575 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 CACNA2D1P54289 1103 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 TMED2Q15363 201 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 CTC1Q2NKJ3 1217 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 GPATCH4Q5T3I0 446 aaKnown RBP11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 FOXB2Q5VYV0 432 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 LRRC74BQ6ZQY2 392 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 STXBP4Q6ZWJ1 553 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 HS2ST1Q7LGA3 356 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 NLRP9Q7RTR0 991 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 CRYGNQ8WXF5 182 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 PTPRN2Q92932 1015 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 FAM20AQ96MK3 541 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 EPAS1Q99814 870 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 DCLK3Q9C098 648 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 LARSQ9P2J5 1176 aaKnown RBP11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 ZNF212Q9UDV6 495 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 NEU2Q9Y3R4 380 aa11.18□□□□□ -0.62
LYSMD1-201ENST00000368908 CLDN3O15551 220 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 SH3BGRP55822 239 aaPredicted RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 KCNA1Q09470 495 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 BFSP1Q12934 665 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 TNIP1Q15025 636 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 KHDC1Q4VXA5 237 aaKnown RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 TAF1BQ53T94 588 aaPredicted RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 FYB2Q5VWT5 728 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 SEPT14Q6ZU15 432 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 PPFIBP2Q8ND30 876 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 C1orf54Q8WWF1 131 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 SCG3Q8WXD2 468 aaKnown RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 RBM41Q96IZ5 413 aaKnown RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 CFAP57Q96MR6 1250 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 TTC25Q96NG3 672 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 MIPEPQ99797 713 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 SYT17Q9BSW7 474 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 NUP85Q9BW27 656 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 GPCPD1Q9NPB8 672 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 DDX43Q9NXZ2 648 aaKnown RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 STX18Q9P2W9 335 aaKnown RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 TBK1Q9UHD2 729 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 RABGAP1Q9Y3P9 1069 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 ZNF536O15090 1300 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 FAM13AO94988 1023 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 BTDP43251 543 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 RCN1Q15293 331 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 CLNKQ7Z7G1 428 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 TXNRD3Q86VQ6 643 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 ATL2Q8NHH9 583 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 FAM81AQ8TBF8 368 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 BTBD10Q9BSF8 475 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 CADM1Q9BY67 442 aaKnown RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 TRABDQ9H4I3 376 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 SYNCQ9H7C4 482 aa11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 NOCTQ9UK39 431 aaKnown RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.17□□□□□ -0.62
LYSMD1-201ENST00000368908 MYH11P35749 1972 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 MEIS1O00470 390 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 LRRN2O75325 713 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 PSMG1O95456 288 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 TROVE2P10155 538 aaKnown RBP eCLIP11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 POLE2P56282 527 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 DAB2IPQ5VWQ8 1189 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 STYK1Q6J9G0 422 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 LRRC47Q8N1G4 583 aaKnown RBP11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 CCDC89Q8N998 374 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 NRG4Q8WWG1 115 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 PTCD3Q96EY7 689 aaKnown RBP11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 GBP5Q96PP8 586 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 PCDHB18PQ96TA0 734 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 PAIP2Q9BPZ3 127 aaKnown RBP11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 VCX3BQ9H321 246 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 VCX3AQ9NNX9 186 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 SLCO1B3Q9NPD5 702 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 AGPAT3Q9NRZ7 376 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 PCMTD2Q9NV79 361 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 IRAK4Q9NWZ3 460 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 JAG2Q9Y219 1238 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 A8MXQ7 604 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 MAP3K7O43318 606 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 ZBED4O75132 1171 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 TRIM49P0CI25 452 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 TRIM49CP0CI26 452 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 GCAP28676 217 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 ADCY8P40145 1251 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 RINT1Q6NUQ1 792 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 RFWD3Q6PCD5 774 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 OTOAQ7RTW8 1153 aa11.16□□□□□ -0.62
LYSMD1-201ENST00000368908 ZCCHC9Q8N567 271 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms