RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SMYD5Q6GMV2 418 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 ENOSF1Q7L5Y1 443 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 ECHDC2Q86YB7 292 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 C1orf127Q8N9H9 656 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 SYN2Q92777 582 aaPredicted RBP13.27□□□□□ -0.29
TUBE1-202ENST00000368662 SEMA4DQ92854 862 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 FAXDC2Q96IV6 333 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 RPS6KC1Q96S38 1066 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 STK33Q9BYT3 514 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 RSAD1Q9HA92 442 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 ZNHIT6Q9NWK9 470 aaKnown RBP13.27□□□□□ -0.29
TUBE1-202ENST00000368662 DPP3Q9NY33 737 aa13.27□□□□□ -0.29
TUBE1-202ENST00000368662 ATICP31939 592 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 MFAP3P55082 362 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 PHLDB3Q6NSJ2 640 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 RRAGAQ7L523 313 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 RSPH1Q8WYR4 309 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 BAP1Q92560 729 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 ELAC1Q9H777 363 aaKnown RBP13.26□□□□□ -0.29
TUBE1-202ENST00000368662 NLRC4Q9NPP4 1024 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 PRDM5Q9NQX1 630 aaPredicted RBP13.26□□□□□ -0.29
TUBE1-202ENST00000368662 DNAJC12Q9UKB3 198 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 PLAGL2Q9UPG8 496 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 FHOD1Q9Y613 1164 aa13.26□□□□□ -0.29
TUBE1-202ENST00000368662 ASS1P00966 412 aaKnown RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 KRT19P08727 400 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 RAG1P15918 1043 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 TBXAS1P24557 533 aaPredicted RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 HNRNPH3P31942 346 aaKnown RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 RBP5P82980 135 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 RAPGEF1Q13905 1077 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 PDXDC1Q6P996 788 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 CNKSR3Q6P9H4 555 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 AGMOQ6ZNB7 445 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 ZNF598Q86UK7 904 aaKnown RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 RTN4RL1Q86UN2 441 aaPredicted RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 PPM1KQ8N3J5 372 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 TMEM199Q8N511 208 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 JAKMIP2Q96AA8 810 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 ZMAT2Q96NC0 199 aaKnown RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 UBE2TQ9NPD8 197 aaPredicted RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 TMEM161AQ9NX61 479 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 KLK14Q9P0G3 267 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 PRKAG2Q9UGJ0 569 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 MKI67P46013 3256 aaKnown RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 ARL5CA6NH57 179 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 LRRC53A6NM62 1247 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 RNF225M0QZC1 329 aaPredicted RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 CLSTN1O94985 981 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 CST3P01034 146 aaPredicted RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 ITGB3P05106 788 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 THP07101 528 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 PFKMP08237 780 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 CCDC172P0C7W6 258 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 ATF7P17544 494 aaPredicted RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 MLH1P40692 756 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 NOP14P78316 857 aaKnown RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 APBA1Q02410 837 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 LRMPQ12912 555 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 IQCEQ6IPM2 695 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 MFSD5Q6N075 450 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 RNF169Q8NCN4 708 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 LINC01599Q8WXQ3 324 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 FAM84AQ96KN4 292 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 BAG1Q99933 345 aaPredicted RBP13.25□□□□□ -0.29
TUBE1-202ENST00000368662 VRTNQ9H8Y1 702 aa13.25□□□□□ -0.29
TUBE1-202ENST00000368662 TRIM43BA6NCK2 446 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 ENPP3O14638 875 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 INPPL1O15357 1258 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 STAU1O95793 577 aaKnown RBP13.24□□□□□ -0.29
TUBE1-202ENST00000368662 P4HA1P13674 534 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 STAT1P42224 750 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 JAM2P57087 298 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 GOLGA8FQ08AF8 430 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 GOLGA8DPQ0D2H9 430 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 MYO1EQ12965 1108 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 IKBKEQ14164 716 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 ZNF699Q32M78 642 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 GLRA4Q5JXX5 417 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 SFMBT2Q5VUG0 894 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 GLB1LQ6UWU2 654 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 RPUSD2Q8IZ73 545 aaKnown RBP13.24□□□□□ -0.29
TUBE1-202ENST00000368662 HELQQ8TDG4 1101 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 LPPQ93052 612 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 TRIM43Q96BQ3 446 aaPredicted RBP13.24□□□□□ -0.29
TUBE1-202ENST00000368662 ZFP42Q96MM3 310 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 PPP1R10Q96QC0 940 aaKnown RBP13.24□□□□□ -0.29
TUBE1-202ENST00000368662 GAD1Q99259 594 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 SIX4Q9UIU6 781 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 HOXA2O43364 376 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 EFCAB14O75071 495 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 FECHP22830 423 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 POLR2BP30876 1174 aaKnown RBP13.24□□□□□ -0.29
TUBE1-202ENST00000368662 PNPLA4P41247 253 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 MYL6P60660 151 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 CDK17Q00537 523 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 MEA1Q16626 185 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 GJB7Q6PEY0 223 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 CYP26C1Q6V0L0 522 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 DEFB128Q7Z7B8 93 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms