RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 GLYCTKQ8IVS8 523 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 MSL3Q8N5Y2 521 aaKnown RBP11.42□□□□□ -0.58
TPM3-212ENST00000368533 PARD3BQ8TEW8 1205 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 NLRP7Q8WX94 980 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 FNBP1Q96RU3 617 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 NTPCRQ9BSD7 190 aaKnown RBP11.42□□□□□ -0.58
TPM3-212ENST00000368533 C16orf70Q9BSU1 422 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 TIPINQ9BVW5 301 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 MYADML2A6NDP7 307 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 CLDN3O15551 220 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 MEFVO15553 781 aaPredicted RBP11.42□□□□□ -0.58
TPM3-212ENST00000368533 ADCY3O60266 1144 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 CEP104O60308 925 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 EVI5O60447 810 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 LCA5LO95447 670 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 MMP3P08254 477 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 ELNP15502 786 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 PRLRP16471 622 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 CYP24A1Q07973 514 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 SPRED3Q2MJR0 410 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 C17orf99Q6UX52 265 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 SV2AQ7L0J3 742 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 IFT20Q8IY31 132 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 GTF3C2Q8WUA4 911 aaPredicted RBP11.42□□□□□ -0.58
TPM3-212ENST00000368533 SLC20A1Q8WUM9 679 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 ZNF516Q92618 1163 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 ZFYVE28Q9HCC9 887 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 PLCB1Q9NQ66 1216 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 RBAKQ9NYW8 714 aaPredicted RBP11.42□□□□□ -0.58
TPM3-212ENST00000368533 SLC45A1Q9Y2W3 748 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 PJA2O43164 708 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 LGR5O75473 907 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 ALCAMQ13740 583 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 RPS6KA1Q15418 735 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 NAB2Q15742 525 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 OR5B17Q8NGF7 314 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 U2AF1L4Q8WU68 220 aaKnown RBP11.42□□□□□ -0.58
TPM3-212ENST00000368533 FAM167AQ96KS9 214 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 KIF9Q9HAQ2 790 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 TSKSQ9UJT2 592 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 ZNF233A6NK53 670 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 EIF4E1BA6NMX2 242 aaKnown RBP11.41□□□□□ -0.58
TPM3-212ENST00000368533 HBP1O60381 514 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 TRPA1O75762 1119 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 C22orf31O95567 290 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 C6orf222P0C671 652 aaPredicted RBP11.41□□□□□ -0.58
TPM3-212ENST00000368533 RFC5P40937 340 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 CARSP49589 748 aaKnown RBP11.41□□□□□ -0.58
TPM3-212ENST00000368533 EPHB4P54760 987 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 DUSP28Q4G0W2 176 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 BRDTQ58F21 947 aaPredicted RBP11.41□□□□□ -0.58
TPM3-212ENST00000368533 PLPPR4Q7Z2D5 763 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 IRF2BP2Q7Z5L9 587 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 FAM228AQ86W67 206 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 PPTC7Q8NI37 304 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 MORC4Q8TE76 937 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 AENQ8WTP8 325 aaKnown RBP11.41□□□□□ -0.58
TPM3-212ENST00000368533 APEX2Q9UBZ4 518 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 TLL2Q9Y6L7 1015 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 PASKQ96RG2 1323 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 SLC15A5A6NIM6 579 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 ENO4A6NNW6 628 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 AP1G2O75843 785 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 GLI1P08151 1106 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 SNX1Q13596 522 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 HIC1Q14526 733 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 GRIK4Q16099 956 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 MAPK6Q16659 721 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 C2CD6Q53TS8 623 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 ALKBH5Q6P6C2 394 aaKnown RBP11.41□□□□□ -0.58
TPM3-212ENST00000368533 FOXR2Q6PJQ5 311 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 CRELD2Q6UXH1 353 aaPredicted RBP11.41□□□□□ -0.58
TPM3-212ENST00000368533 VPS36Q86VN1 386 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 SLC9A9Q8IVB4 645 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 CCDC13Q8IYE1 715 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 TBC1D31Q96DN5 1066 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 ST6GALNAC4Q9H4F1 302 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 CDHR5Q9HBB8 845 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 SLC40A1Q9NP59 571 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 TAS2R14Q9NYV8 317 aa11.41□□□□□ -0.58
TPM3-212ENST00000368533 TRIP12Q14669 1992 aaPredicted RBP11.4□□□□□ -0.58
TPM3-212ENST00000368533 F8VZ95 297 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 CYP26A1O43174 497 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 OPA1O60313 960 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 KRT14P02533 472 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 KRT5P13647 590 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 GCKP35557 465 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 ZNF568Q3ZCX4 644 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 MORN1Q5T089 497 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 CFAP58Q5T655 872 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 ZBTB8OSQ8IWT0 167 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 TSEN2Q8NCE0 465 aaKnown RBP11.4□□□□□ -0.58
TPM3-212ENST00000368533 LMO3Q8TAP4 145 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 SYN2Q92777 582 aaPredicted RBP11.4□□□□□ -0.58
TPM3-212ENST00000368533 C17orf75Q9HAS0 396 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 UMODL1Q5DID0 1318 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 TRPM7Q96QT4 1865 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 TMEM88BA6NKF7 163 aa11.4□□□□□ -0.58
TPM3-212ENST00000368533 MSCO60682 206 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms