RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KLHL23Q8NBE8 558 aa15.04■□□□□ -0
TPM3-211ENST00000368531 FBXO22Q8NEZ5 403 aa15.04■□□□□ -0
TPM3-211ENST00000368531 PARD3BQ8TEW8 1205 aa15.04■□□□□ -0
TPM3-211ENST00000368531 ZNF516Q92618 1163 aa15.04■□□□□ -0
TPM3-211ENST00000368531 CLP1Q92989 425 aaKnown RBP15.04■□□□□ -0
TPM3-211ENST00000368531 ANKRD36BP1Q96IX9 119 aa15.04■□□□□ -0
TPM3-211ENST00000368531 FAM161BQ96MY7 647 aa15.04■□□□□ -0
TPM3-211ENST00000368531 CGRRF1Q99675 332 aa15.04■□□□□ -0
TPM3-211ENST00000368531 TMEM175Q9BSA9 504 aa15.04■□□□□ -0
TPM3-211ENST00000368531 MKNK1Q9BUB5 465 aa15.04■□□□□ -0
TPM3-211ENST00000368531 COLEC11Q9BWP8 271 aa15.04■□□□□ -0
TPM3-211ENST00000368531 MTMR12Q9C0I1 747 aa15.04■□□□□ -0
TPM3-211ENST00000368531 NAT10Q9H0A0 1025 aaKnown RBP15.04■□□□□ -0
TPM3-211ENST00000368531 ZNF576Q9H609 170 aa15.04■□□□□ -0
TPM3-211ENST00000368531 INTS13Q9NVM9 706 aa15.04■□□□□ -0
TPM3-211ENST00000368531 SPG21Q9NZD8 308 aa15.04■□□□□ -0
TPM3-211ENST00000368531 ARMCX3Q9UH62 379 aaPredicted RBP15.04■□□□□ -0
TPM3-211ENST00000368531 DERAQ9Y315 318 aa15.04■□□□□ -0
TPM3-211ENST00000368531 C2CD2Q9Y426 696 aa15.04■□□□□ -0
TPM3-211ENST00000368531 LRRIQ3A6PVS8 624 aaPredicted RBP15.03■□□□□ -0
TPM3-211ENST00000368531 MAPK13O15264 365 aa15.03■□□□□ -0
TPM3-211ENST00000368531 SLC16A3O15427 465 aaKnown RBP15.03■□□□□ -0
TPM3-211ENST00000368531 KRT19P08727 400 aa15.03■□□□□ -0
TPM3-211ENST00000368531 BFSP1Q12934 665 aa15.03■□□□□ -0
TPM3-211ENST00000368531 DUOXA2Q1HG44 320 aa15.03■□□□□ -0
TPM3-211ENST00000368531 CT47A1Q5JQC4 288 aaPredicted RBP15.03■□□□□ -0
TPM3-211ENST00000368531 SCARA3Q6AZY7 606 aa15.03■□□□□ -0
TPM3-211ENST00000368531 FOXR2Q6PJQ5 311 aa15.03■□□□□ -0
TPM3-211ENST00000368531 INTS8Q75QN2 995 aaKnown RBP15.03■□□□□ -0
TPM3-211ENST00000368531 WDR49Q8IV35 697 aa15.03■□□□□ -0
TPM3-211ENST00000368531 SLC39A11Q8N1S5 342 aa15.03■□□□□ -0
TPM3-211ENST00000368531 AOPEPQ8N6M6 819 aa15.03■□□□□ -0
TPM3-211ENST00000368531 ENOX1Q8TC92 643 aaKnown RBP15.03■□□□□ -0
TPM3-211ENST00000368531 TMC2Q8TDI7 906 aa15.03■□□□□ -0
TPM3-211ENST00000368531 BORCS6Q96GS4 357 aa15.03■□□□□ -0
TPM3-211ENST00000368531 TSPAN18Q96SJ8 248 aa15.03■□□□□ -0
TPM3-211ENST00000368531 ALG13Q9NP73 1137 aaKnown RBP15.03■□□□□ -0
TPM3-211ENST00000368531 RWDD3Q9Y3V2 267 aa15.03■□□□□ -0
TPM3-211ENST00000368531 NFE2L3Q9Y4A8 694 aa15.03■□□□□ -0
TPM3-211ENST00000368531 SCN1AP35498 2009 aa15.02■□□□□ -0
TPM3-211ENST00000368531 EPOPA6NHQ4 379 aa15.02■□□□□ -0
TPM3-211ENST00000368531 PODXLO00592 558 aa15.02■□□□□ -0
TPM3-211ENST00000368531 PPEF2O14830 753 aa15.02■□□□□ -0
TPM3-211ENST00000368531 PHACTR2O75167 634 aa15.02■□□□□ -0
TPM3-211ENST00000368531 TADA2AO75478 443 aa15.02■□□□□ -0
TPM3-211ENST00000368531 FGF18O76093 207 aa15.02■□□□□ -0
TPM3-211ENST00000368531 B3GAT3O94766 335 aa15.02■□□□□ -0
TPM3-211ENST00000368531 ITGB3P05106 788 aa15.02■□□□□ -0
TPM3-211ENST00000368531 ITGB1P05556 798 aa15.02■□□□□ -0
TPM3-211ENST00000368531 CYP3A5P20815 502 aa15.02■□□□□ -0
TPM3-211ENST00000368531 POLR2BP30876 1174 aaKnown RBP15.02■□□□□ -0
TPM3-211ENST00000368531 ZNF165P49910 485 aa15.02■□□□□ -0
TPM3-211ENST00000368531 BIRC3Q13489 604 aa15.02■□□□□ -0
TPM3-211ENST00000368531 GPM6BQ13491 265 aa15.02■□□□□ -0
TPM3-211ENST00000368531 UPP1Q16831 310 aa15.02■□□□□ -0
TPM3-211ENST00000368531 C1orf220Q5T0J3 134 aa15.02■□□□□ -0
TPM3-211ENST00000368531 ZNF697Q5TEC3 545 aa15.02■□□□□ -0
TPM3-211ENST00000368531 NT5DC4Q86YG4 428 aa15.02■□□□□ -0
TPM3-211ENST00000368531 BCL7CQ8WUZ0 217 aaPredicted RBP15.02■□□□□ -0
TPM3-211ENST00000368531 DDX27Q96GQ7 796 aaKnown RBP15.02■□□□□ -0
TPM3-211ENST00000368531 CNOT6LQ96LI5 555 aaKnown RBP15.02■□□□□ -0
TPM3-211ENST00000368531 UROC1Q96N76 676 aa15.02■□□□□ -0
TPM3-211ENST00000368531 SAMD11Q96NU1 681 aa15.02■□□□□ -0
TPM3-211ENST00000368531 TTYH1Q9H313 450 aaPredicted RBP15.02■□□□□ -0
TPM3-211ENST00000368531 METTL14Q9HCE5 456 aaKnown RBP15.02■□□□□ -0
TPM3-211ENST00000368531 SAMSN1Q9NSI8 373 aaKnown RBP15.02■□□□□ -0
TPM3-211ENST00000368531 MARCH5Q9NX47 278 aa15.02■□□□□ -0
TPM3-211ENST00000368531 MAGEC2Q9UBF1 373 aaPredicted RBP15.02■□□□□ -0
TPM3-211ENST00000368531 AGAP1Q9UPQ3 857 aa15.02■□□□□ -0
TPM3-211ENST00000368531 COL4A4P53420 1690 aaPredicted RBP15.01□□□□□ -0.01
TPM3-211ENST00000368531 TRIOBPQ9H2D6 2365 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 I3L4J1 428 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 CLSTN1O94985 981 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 KIF4AO95239 1232 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 GNA14O95837 355 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 LRPAP1P30533 357 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 RPL9P32969 192 aaKnown RBP15.01□□□□□ -0.01
TPM3-211ENST00000368531 BRCC3P46736 316 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 GCLMP48507 274 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 MYL5Q02045 173 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 PPP3CAQ08209 521 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 C9orf57Q5W0N0 161 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 DCLRE1AQ6PJP8 1040 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 TRAPPC11Q7Z392 1133 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 FRMD5Q7Z6J6 570 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 USP37Q86T82 979 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 IRF2BP1Q8IU81 584 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 C1orf127Q8N9H9 656 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 C3orf58Q8NDZ4 430 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 GDPD5Q8WTR4 605 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 TMEM169Q96HH4 297 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 IGSF21Q96ID5 467 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 PLVAPQ9BX97 442 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 THAP9Q9H5L6 903 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 FANCLQ9NW38 375 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 R3HCC1Q9Y3T6 440 aaKnown RBP15.01□□□□□ -0.01
TPM3-211ENST00000368531 NUB1Q9Y5A7 615 aa15.01□□□□□ -0.01
TPM3-211ENST00000368531 GRM6O15303 877 aa15□□□□□ -0.01
TPM3-211ENST00000368531 C4BPAP04003 597 aaKnown RBP15□□□□□ -0.01
TPM3-211ENST00000368531 RB1P06400 928 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms