RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 DHX58Q96C10 678 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 RPGRIP1Q96KN7 1286 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 PANK4Q9NVE7 773 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 TUBGCP4Q9UGJ1 667 aa20.65■□□□□ 0.9
CKS1B-203ENST00000368439 I3L4J1 428 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 ADAM12O43184 909 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 SPATA31D3P0C874 917 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 MYBP10242 640 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 IDEP14735 1019 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 TKTP29401 623 aaKnown RBP20.64■□□□□ 0.89
CKS1B-203ENST00000368439 ME1P48163 572 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 L1TD1Q5T7N2 865 aaKnown RBP20.64■□□□□ 0.89
CKS1B-203ENST00000368439 CNNM4Q6P4Q7 775 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 SPATA31D4Q6ZUB0 917 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 GLYCTKQ8IVS8 523 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 IQUBQ8NA54 791 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 RIPOR3Q96MK2 946 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 C1QTNF1Q9BXJ1 281 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 TRIM9Q9C026 710 aa20.64■□□□□ 0.89
CKS1B-203ENST00000368439 DCXO43602 365 aa20.63■□□□□ 0.89
CKS1B-203ENST00000368439 LRPAP1P30533 357 aa20.63■□□□□ 0.89
CKS1B-203ENST00000368439 PPP2R3AQ06190 1150 aa20.63■□□□□ 0.89
CKS1B-203ENST00000368439 ATAT1Q5SQI0 421 aa20.63■□□□□ 0.89
CKS1B-203ENST00000368439 SLFN12LQ6IEE8 588 aa20.63■□□□□ 0.89
CKS1B-203ENST00000368439 CRELD2Q6UXH1 353 aaPredicted RBP20.63■□□□□ 0.89
CKS1B-203ENST00000368439 RSPO2Q6UXX9 243 aaPredicted RBP20.63■□□□□ 0.89
CKS1B-203ENST00000368439 C15orf39Q6ZRI6 1047 aa20.63■□□□□ 0.89
CKS1B-203ENST00000368439 RHOBTB2Q9BYZ6 727 aa20.63■□□□□ 0.89
CKS1B-203ENST00000368439 RPF1Q9H9Y2 349 aaKnown RBP20.63■□□□□ 0.89
CKS1B-203ENST00000368439 MTRRQ9UBK8 725 aa20.63■□□□□ 0.89
CKS1B-203ENST00000368439 MUTYHQ9UIF7 546 aa20.63■□□□□ 0.89
CKS1B-203ENST00000368439 MYO10Q9HD67 2058 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 DOCK6Q96HP0 2047 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 POLR2DO15514 142 aaKnown RBP20.62■□□□□ 0.89
CKS1B-203ENST00000368439 TRAPPC3O43617 180 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 RFPL2O75678 378 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 GCNT3O95395 438 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 ALADP13716 330 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 CYP3A5P20815 502 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 ACOT2P49753 483 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 ADALQ6DHV7 355 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 PDXDC1Q6P996 788 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 ZNF707Q96C28 371 aaPredicted RBP20.62■□□□□ 0.89
CKS1B-203ENST00000368439 KIF12Q96FN5 646 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 ACCSQ96QU6 501 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 C7orf25Q9BPX7 421 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 LRRC27Q9C0I9 530 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 PLEKHA4Q9H4M7 779 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 DPP7Q9UHL4 492 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 FBXW11Q9UKB1 542 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 AGO2Q9UKV8 859 aaKnown RBP20.62■□□□□ 0.89
CKS1B-203ENST00000368439 UBQLN1Q9UMX0 589 aaKnown RBP20.62■□□□□ 0.89
CKS1B-203ENST00000368439 BACE2Q9Y5Z0 518 aa20.62■□□□□ 0.89
CKS1B-203ENST00000368439 MRPL58Q14197 206 aaKnown RBP20.61■□□□□ 0.89
CKS1B-203ENST00000368439 CCDC65Q8IXS2 484 aa20.61■□□□□ 0.89
CKS1B-203ENST00000368439 KREMEN2Q8NCW0 462 aa20.61■□□□□ 0.89
CKS1B-203ENST00000368439 GLIS3Q8NEA6 775 aa20.61■□□□□ 0.89
CKS1B-203ENST00000368439 LEO1Q8WVC0 666 aaPredicted RBP20.61■□□□□ 0.89
CKS1B-203ENST00000368439 HPS3Q969F9 1004 aa20.61■□□□□ 0.89
CKS1B-203ENST00000368439 TSPAN18Q96SJ8 248 aa20.61■□□□□ 0.89
CKS1B-203ENST00000368439 PCDHB13Q9Y5F0 798 aa20.61■□□□□ 0.89
CKS1B-203ENST00000368439 SCN1AP35498 2009 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 CCDC195A0A1B0GUA6 201 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 C2CD4DB7Z1M9 353 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 TBC1D4O60343 1298 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 GPR37L1O60883 481 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 SP100P23497 879 aaPredicted RBP20.6■□□□□ 0.89
CKS1B-203ENST00000368439 GUCY2FP51841 1108 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 POU5F1Q01860 360 aaKnown RBP20.6■□□□□ 0.89
CKS1B-203ENST00000368439 EHHADHQ08426 723 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 ALCAMQ13740 583 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 RAB33AQ14088 237 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 SPATA1Q5VX52 437 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 JADE1Q6IE81 842 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 CD302Q8IX05 232 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 ZSWIM2Q8NEG5 633 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 SUSD3Q96L08 255 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 MAGEF1Q9HAY2 307 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 FAM13BQ9NYF5 915 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 EXOC7Q9UPT5 735 aa20.6■□□□□ 0.89
CKS1B-203ENST00000368439 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.6■□□□□ 0.89
CKS1B-203ENST00000368439 TECTAO75443 2155 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 DOCK8Q8NF50 2099 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 SPDYE4A6NLX3 237 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 SYN3O14994 580 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 ZMYND10O75800 440 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 PRPF6O94906 941 aaKnown RBP20.59■□□□□ 0.89
CKS1B-203ENST00000368439 OR1D2P34982 312 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 HOXD13P35453 343 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 AARSP49588 968 aaKnown RBP eCLIP20.59■□□□□ 0.89
CKS1B-203ENST00000368439 AMPD3Q01432 767 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 POSTNQ15063 836 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 VARS2Q5ST30 1063 aaKnown RBP20.59■□□□□ 0.89
CKS1B-203ENST00000368439 CYP26C1Q6V0L0 522 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 ANKS3Q6ZW76 656 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 POMGNT1Q8WZA1 660 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 LRFN3Q9BTN0 628 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 ASB7Q9H672 318 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 ZDHHC7Q9NXF8 308 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 KCNH3Q9ULD8 1083 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms