RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ARMCX5Q6P1M9 558 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 CD302Q8IX05 232 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 NELFCDQ8IXH7 590 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 TMEM87AQ8NBN3 555 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 FAM212AQ96EL1 285 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 KLHL5Q96PQ7 755 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 TSPAN18Q96SJ8 248 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 FAM213AQ9BRX8 229 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 BARX2Q9UMQ3 279 aaPredicted RBP24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 HCFC2Q9Y5Z7 792 aa24.39■■□□□ 1.49
ECHDC1-203ENST00000368291 FSD2A1L4K1 749 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 GOLGA8IPA6NC78 632 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 GOLGA8JA6NMD2 632 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 NFICP08651 508 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 RPL9P32969 192 aaKnown RBP24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 BRCC3P46736 316 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 NDUFV1P49821 464 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 GUCY2FP51841 1108 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 TJAP1Q5JTD0 557 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 RTP2Q5QGT7 225 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 FAM171A1Q5VUB5 890 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 ASB7Q9H672 318 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 RXFP1Q9HBX9 757 aa24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 UBQLN1Q9UMX0 589 aaKnown RBP24.38■■□□□ 1.49
ECHDC1-203ENST00000368291 RHOBTB3O94955 611 aa24.37■■□□□ 1.49
ECHDC1-203ENST00000368291 LDHAP00338 332 aaKnown RBP24.37■■□□□ 1.49
ECHDC1-203ENST00000368291 CYP3A5P20815 502 aa24.37■■□□□ 1.49
ECHDC1-203ENST00000368291 LRPAP1P30533 357 aa24.37■■□□□ 1.49
ECHDC1-203ENST00000368291 LLGL2Q6P1M3 1020 aa24.37■■□□□ 1.49
ECHDC1-203ENST00000368291 GPR65Q8IYL9 337 aa24.37■■□□□ 1.49
ECHDC1-203ENST00000368291 SLC22A17Q8WUG5 538 aa24.37■■□□□ 1.49
ECHDC1-203ENST00000368291 AGPAT3Q9NRZ7 376 aa24.37■■□□□ 1.49
ECHDC1-203ENST00000368291 I3L4J1 428 aa24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 EXTL3O43909 919 aa24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 SPATA1Q5VX52 437 aa24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 KIAA1841Q6NSI8 718 aa24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 KANK3Q6NY19 840 aa24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 BRSK2Q8IWQ3 736 aa24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 EFCAB13Q8IY85 973 aa24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 RIN2Q8WYP3 895 aaPredicted RBP24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 SSX2IPQ9Y2D8 614 aa24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 DERAQ9Y315 318 aa24.36■■□□□ 1.49
ECHDC1-203ENST00000368291 KIAA0391O15091 583 aaKnown RBP24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 TEX28O15482 410 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 FGFR3P22607 806 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 ELAVL2Q12926 359 aaKnown RBP24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 PNOCQ13519 176 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 CLUL1Q15846 466 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 KNOP1Q1ED39 458 aaKnown RBP24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 PRSS55Q6UWB4 352 aaPredicted RBP24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 GPD1LQ8N335 351 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 LNX1Q8TBB1 728 aaPredicted RBP24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 TIGD1Q96MW7 591 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 TTPALQ9BTX7 342 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 EMILIN2Q9BXX0 1053 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 TSHZ2Q9NRE2 1034 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 HSPBP1Q9NZL4 362 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 C2CD2Q9Y426 696 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 C5orf42Q9H799 3197 aa24.35■■□□□ 1.49
ECHDC1-203ENST00000368291 CLIC2O15247 247 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 IL18RAPO95256 599 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 EPCAMP16422 314 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 CLCN4P51793 760 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 KCNB1Q14721 858 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 TMEM132DQ14C87 1099 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 CEP57Q86XR8 500 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 PIK3R5Q8WYR1 880 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 FBXL18Q96ME1 805 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 CD207Q9UJ71 328 aa24.34■■□□□ 1.49
ECHDC1-203ENST00000368291 GRXCR2A6NFK2 248 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 PPEF2O14830 753 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 XPOTO43592 962 aaKnown RBP24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 KLRC2P26717 231 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 TKTP29401 623 aaKnown RBP24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 SNRPFP62306 86 aaKnown RBP24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 PTCRAQ6ISU1 281 aaPredicted RBP24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 ANKRD54Q6NXT1 300 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 SYCE2Q6PIF2 218 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 CBWD2Q8IUF1 395 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 C12orf56Q8IXR9 622 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 SMRP1Q8NCR6 262 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 BEST2Q8NFU1 509 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 KCTD10Q9H3F6 313 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 RBAKQ9NYW8 714 aaPredicted RBP24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 FNIP2Q9P278 1114 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 C2orf16Q68DN1 1984 aa24.33■■□□□ 1.49
ECHDC1-203ENST00000368291 ANO9A1A5B4 782 aa24.32■■□□□ 1.48
ECHDC1-203ENST00000368291 MBTPS2O43462 519 aa24.32■■□□□ 1.48
ECHDC1-203ENST00000368291 IL9P15248 144 aa24.32■■□□□ 1.48
ECHDC1-203ENST00000368291 RPL17P18621 184 aaKnown RBP24.32■■□□□ 1.48
ECHDC1-203ENST00000368291 CASP10Q92851 521 aa24.32■■□□□ 1.48
ECHDC1-203ENST00000368291 SUSD3Q96L08 255 aa24.32■■□□□ 1.48
ECHDC1-203ENST00000368291 S1PR5Q9H228 398 aa24.32■■□□□ 1.48
ECHDC1-203ENST00000368291 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.32■■□□□ 1.48
ECHDC1-203ENST00000368291 TSC2P49815 1807 aa24.32■■□□□ 1.48
ECHDC1-203ENST00000368291 TRAPPC3O43617 180 aa24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 AARSP49588 968 aaKnown RBP eCLIP24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 C9orf57Q5W0N0 161 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms