RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 CDC42EP1Q00587 391 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 CNTN2Q02246 1040 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 SPARCL1Q14515 664 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 MUM1L1Q5H9M0 696 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 CYP4A22Q5TCH4 519 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 CCNI2Q6ZMN8 369 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-203ENST00000368207 PID1Q7Z2X4 250 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 C4orf19Q8IY42 314 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 SH2D3CQ8N5H7 860 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 EXT2Q93063 718 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 UBN1Q9NPG3 1134 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 ARHGAP20Q9P2F6 1191 aa13.01□□□□□ -0.33
PTPRK-203ENST00000368207 PIK3C2AO00443 1686 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 NFAT5O94916 1531 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 KRT38O76015 456 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 IL18RAPO95256 599 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 CARSP49589 748 aaKnown RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 KIZQ2M2Z5 673 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 ANKMY2Q8IV38 441 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 C1orf131Q8NDD1 294 aaKnown RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 C9orf72Q96LT7 481 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 OSBPL8Q9BZF1 889 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 VPS11Q9H270 941 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 WDR35Q9P2L0 1181 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 GTF2A2P52657 109 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 TMPRSS15P98073 1019 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 EPM2AIP1Q7L775 607 aaPredicted RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 BTBD6Q96KE9 485 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 DUSP9Q99956 384 aaKnown RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 EPB41L3Q9Y2J2 1087 aaPredicted RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 ANGPTL3Q9Y5C1 460 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 A0A1B0GUA9 196 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 VIL1P09327 827 aaKnown RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 MUTP22033 750 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 CLNS1AP54105 237 aaKnown RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 TTC25Q96NG3 672 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 P2RX7Q99572 595 aaKnown RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 GOLGA8CPA6NN73 597 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 VTNP04004 478 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 HNRNPH2P55795 449 aaKnown RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 PPP2R2AP63151 447 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 CUL2Q13617 745 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 AMHR2Q16671 573 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 LY6KQ17RY6 165 aa13□□□□□ -0.33
PTPRK-203ENST00000368207 TRIM56Q9BRZ2 755 aaKnown RBP13□□□□□ -0.33
PTPRK-203ENST00000368207 MRC1P22897 1456 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 A0A0G2JND7 137 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 H3BRJ5 948 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 NAMPTP43490 491 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 CDK17Q00537 523 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 RAB44Q7Z6P3 723 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-203ENST00000368207 ELMO3Q96BJ8 720 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 ACSF2Q96CM8 615 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-203ENST00000368207 ATP6V1G3Q96LB4 118 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 MROH8Q9H579 483 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 OLFML3Q9NRN5 406 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 CPA4Q9UI42 421 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 A0A087WUV0 522 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-203ENST00000368207 PHF2O75151 1096 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 GUCY2CP25092 1073 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 RBBP5Q15291 538 aaKnown RBP12.99□□□□□ -0.33
PTPRK-203ENST00000368207 E2F4Q16254 413 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 FIGNQ5HY92 759 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 SH2D4BQ5SQS7 431 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 NT5DC1Q5TFE4 455 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 TRAPPC11Q7Z392 1133 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 CDKL3Q8IVW4 592 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-203ENST00000368207 RCOR2Q8IZ40 523 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 VPS39Q96JC1 886 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 GCNAQ96QF7 691 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 NUF2Q9BZD4 464 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 BFARQ9NZS9 450 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 APOL1O14791 398 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 KCNN4O15554 427 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 ITGA4P13612 1032 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 COG7P83436 770 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 SLC12A1Q13621 1099 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 MUM1Q2TAK8 710 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 HIBCHQ6NVY1 386 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-203ENST00000368207 USP38Q8NB14 1042 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 GLIS3Q8NEA6 775 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 OR2W6PQ8NHA6 318 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 TPCN2Q8NHX9 752 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 AGAP3Q96P47 875 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 GBA2Q9HCG7 927 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-203ENST00000368207 DONSONQ9NYP3 566 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 GRIK1P39086 918 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 SULT1E1P49888 294 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 SESN2P58004 480 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-203ENST00000368207 P3H1Q32P28 736 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 TMEM119Q4V9L6 283 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 TRIM68Q6AZZ1 485 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 SV2AQ7L0J3 742 aa12.99□□□□□ -0.33
PTPRK-203ENST00000368207 DHX38Q92620 1227 aaKnown RBP12.99□□□□□ -0.33
PTPRK-203ENST00000368207 UPP2O95045 317 aa12.98□□□□□ -0.33
PTPRK-203ENST00000368207 S100BP04271 92 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-203ENST00000368207 APRTP07741 180 aa12.98□□□□□ -0.33
PTPRK-203ENST00000368207 NCF2P19878 526 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-203ENST00000368207 FKBP1AP62942 108 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms