RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MTG1Q9BT17 334 aaPredicted RBP12.37□□□□□ -0.43
USF1-201ENST00000368019 OSBPL7Q9BZF2 842 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 SIX2Q9NPC8 291 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 MCM8Q9UJA3 840 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 PCDHA11Q9Y5I1 949 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 SLC4A7Q9Y6M7 1214 aa12.37□□□□□ -0.43
USF1-201ENST00000368019 TCF20Q9UGU0 1960 aaKnown RBP12.37□□□□□ -0.43
USF1-201ENST00000368019 MIF4GDA9UHW6 222 aaKnown RBP12.36□□□□□ -0.43
USF1-201ENST00000368019 KPNA6O60684 536 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 AGTP01019 485 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 PFKMP08237 780 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 MYL3P08590 195 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 MYOGP15173 224 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 MUTP22033 750 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 RABGGTBP53611 331 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 ADCY2Q08462 1091 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 TTLL4Q14679 1199 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 SKIDA1Q1XH10 827 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 NBPF20Q3BBV1 942 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 KRT71Q3SY84 523 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 CYB5D1Q6P9G0 228 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 CRELD2Q6UXH1 353 aaPredicted RBP12.36□□□□□ -0.43
USF1-201ENST00000368019 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 ANKS4BQ8N8V4 417 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 CCDC197Q8NCU1 140 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 OR6J1Q8NGC5 347 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 UBLCP1Q8WVY7 318 aaPredicted RBP12.36□□□□□ -0.43
USF1-201ENST00000368019 COPS5Q92905 334 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 CHMP6Q96FZ7 201 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 ASB2Q96Q27 587 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 HINFPQ9BQA5 517 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 SYT11Q9BT88 431 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 NSRP1Q9H0G5 558 aaKnown RBP12.36□□□□□ -0.43
USF1-201ENST00000368019 NEUROG2Q9H2A3 272 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 JMJD4Q9H9V9 463 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
USF1-201ENST00000368019 OLFML3Q9NRN5 406 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 DONSONQ9NYP3 566 aa12.36□□□□□ -0.43
USF1-201ENST00000368019 PACSIN2Q9UNF0 486 aaPredicted RBP12.36□□□□□ -0.43
USF1-201ENST00000368019 NOVA2Q9UNW9 492 aaKnown RBP12.36□□□□□ -0.43
USF1-201ENST00000368019 DDX3XO00571 662 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■■■□□ 15.5
USF1-201ENST00000368019 PODXLO00592 558 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 ZBTB5O15062 677 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 MGRN1O60291 552 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 MARCH6O60337 910 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 ARIH2O95376 493 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 RPA1P27694 616 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 HPDP32754 393 aaPredicted RBP12.35□□□□□ -0.43
USF1-201ENST00000368019 MMP13P45452 471 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 SCTRP47872 440 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
USF1-201ENST00000368019 DHX9Q08211 1270 aaKnown RBP12.35□□□□□ -0.43
USF1-201ENST00000368019 GIT2Q14161 759 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 MYBPC2Q14324 1141 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 Q4G0T1 1027 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 DUPD1Q68J44 220 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 CCDC62Q6P9F0 684 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 GIMAP7Q8NHV1 300 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 NEK9Q8TD19 979 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 ATP8B4Q8TF62 1192 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 CRYGNQ8WXF5 182 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 STK33Q9BYT3 514 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 MAF1Q9H063 256 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 DDX47Q9H0S4 455 aaKnown RBP12.35□□□□□ -0.43
USF1-201ENST00000368019 PABPC3Q9H361 631 aaKnown RBP12.35□□□□□ -0.43
USF1-201ENST00000368019 RABEP2Q9H5N1 569 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 ATP6V0A4Q9HBG4 840 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 THEGQ9P2T0 379 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 CNOT8Q9UFF9 292 aaKnown RBP12.35□□□□□ -0.43
USF1-201ENST00000368019 KIAA1024Q9UPX6 916 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 XIRP2A4UGR9 3374 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 FRMPD4Q14CM0 1322 aa12.35□□□□□ -0.43
USF1-201ENST00000368019 CCT8L1PA6NM43 557 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 E9PMD0 336 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 TNFRSF10AO00220 468 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 DDX3YO15523 660 aaKnown RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 DAPK3O43293 454 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 KRT18P05783 430 aaKnown RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 IQCF3P0C7M6 154 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 TXNP10599 105 aaKnown RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 EZRP15311 586 aaKnown RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 ATP2A2P16615 1042 aaKnown RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 SLC9A1P19634 815 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 POU3F3P20264 500 aaPredicted RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 IGFBP4P22692 258 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 CHRNA3P32297 505 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 RFC2P35250 354 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 SOX5P35711 763 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 MAGOHP61326 146 aaKnown RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 PPP2R5AQ15172 486 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 TRADDQ15628 312 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 CCDC85BQ15834 202 aaPredicted RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 BRDTQ58F21 947 aaPredicted RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 ODF2Q5BJF6 829 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 TNFAIP8L3Q5GJ75 292 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 C6orf118Q5T5N4 469 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 C11orf63Q6NUN7 778 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 PIGWQ7Z7B1 504 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms