RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 OAZ1P54368 228 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 GALCP54803 685 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 RHBDL3P58872 404 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 NNTQ13423 1086 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 MTF1Q14872 753 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 NT5C1AQ9BXI3 368 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
SYNE1-204ENST00000367248 PXMP2Q9NR77 195 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 ITIH6Q6UXX5 1313 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 OGTO15294 1046 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 VIL1P09327 827 aaKnown RBP12.24□□□□□ -0.45
SYNE1-204ENST00000367248 SLC1A1P43005 524 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 STX1BP61266 288 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 PPATQ06203 517 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 DNERQ8NFT8 737 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 GPRC5CQ9NQ84 441 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 KRT38O76015 456 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 SULT1E1P49888 294 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 Q4G0T1 1027 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 HP1BP3Q5SSJ5 553 aaPredicted RBP12.24□□□□□ -0.45
SYNE1-204ENST00000367248 USP50Q70EL3 339 aaPredicted RBP12.24□□□□□ -0.45
SYNE1-204ENST00000367248 ZFPM1Q8IX07 1006 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 NLGN2Q8NFZ4 835 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 SEPT8Q92599 483 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 TTC7AQ9ULT0 858 aaPredicted RBP12.24□□□□□ -0.45
SYNE1-204ENST00000367248 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
SYNE1-204ENST00000367248 SUN1O94901 812 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 SERPINB6P35237 376 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 SV2CQ496J9 727 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 ALS2CLQ60I27 953 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 KLHL11Q9NVR0 708 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 FBXL21Q9UKT6 434 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 MYPNQ86TC9 1320 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 STRNO43815 780 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 EVI5O60447 810 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 SERPIND1P05546 499 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 FGFR4P22455 802 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 TOB1P50616 345 aaPredicted RBP12.24□□□□□ -0.45
SYNE1-204ENST00000367248 CAV1Q03135 178 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 CASP8Q14790 479 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 C10orf120Q5SQS8 335 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 ANKS1AQ92625 1134 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 EPAS1Q99814 870 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 GRID2IPA4D2P6 1211 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 TTC36A6NLP5 189 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 MAP3K13O43283 966 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 CLCN6P51797 869 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 ORC1Q13415 861 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 NAA25Q14CX7 972 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 C4orf19Q8IY42 314 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 UBE2Q2Q8WVN8 375 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 FGD4Q96M96 766 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 RASSF4Q9H2L5 321 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 PLEKHA5Q9HAU0 1116 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 NAGPAQ9UK23 515 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 WDR91A4D1P6 747 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 ADCY3O60266 1144 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 WEE2P0C1S8 567 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 TAF6P49848 677 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 PAPOLAP51003 745 aaKnown RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 CYP4A22Q5TCH4 519 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 FBXL16Q8N461 479 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 CERS5Q8N5B7 392 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 OSMRQ99650 979 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 VCXQ9H320 206 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 PACSIN2Q9UNF0 486 aaPredicted RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 PPP1R3GB7ZBB8 358 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 GHRP10912 638 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 YWHAHQ04917 246 aaPredicted RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 VGLL4Q14135 290 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 ZSCAN26Q16670 478 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 ARHGAP15Q53QZ3 475 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 MAP3K21Q5TCX8 1036 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 SPATS2Q86XZ4 545 aaKnown RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 OR6P1Q8NGX9 317 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 ASCC2Q9H1I8 757 aaPredicted RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 MFSD1Q9H3U5 465 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 AGPAT5Q9NUQ2 364 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 ITM2BQ9Y287 266 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 E5RI56 91 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 HSD17B4P51659 736 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 BTG3Q14201 252 aaPredicted RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 NR1I3Q14994 352 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 TADA2BQ86TJ2 420 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 CACUL1Q86Y37 369 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 VCX3BQ9H321 246 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 FAM198AQ9UFP1 575 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 POMCP01189 267 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 PAMP19021 973 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 PNPLA4P41247 253 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 CCL23P55773 120 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 ADCY2Q08462 1091 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 TTC19Q6DKK2 380 aaPredicted RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 PABPC5Q96DU9 382 aaKnown RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 CNOT10Q9H9A5 744 aaKnown RBP12.23□□□□□ -0.45
SYNE1-204ENST00000367248 RASGRP2Q7LDG7 609 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 CHP1Q99653 195 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms