RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ANKFY1Q9P2R3 1169 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 DMDP11532 3685 aa14.93□□□□□ -0.02
TNFRSF1A-202ENST00000366159 A0A0B4J269 797 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 K7ELQ4 463 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TRAK2O60296 914 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ABLIM3O94929 683 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 CLTAP09496 248 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 HARSP12081 509 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 MARCKSP29966 332 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TNFSF9P41273 254 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TDGQ13569 410 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 DHX8Q14562 1220 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SUGP1Q8IWZ8 645 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 MYCT1Q8N699 235 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.92□□□□□ -0.022e-6■■□□□ 12.2
TNFRSF1A-202ENST00000366159 DUSP12Q9UNI6 340 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 CDY1Q9Y6F8 540 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 DOCK6Q96HP0 2047 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PIEZO1Q92508 2521 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 USP34Q70CQ2 3546 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 MYO15AQ9UKN7 3530 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NOTCH4Q99466 2003 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ANHXE9PGG2 379 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SYN3O14994 580 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 FAM13AO94988 1023 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 C8AP07357 584 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 CXCL8P10145 99 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 LAMP2P13473 410 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 LRPAP1P30533 357 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TCF15Q12870 199 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 VARS2Q5ST30 1063 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ZBTB41Q5SVQ8 909 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 AXDND1Q5T1B0 1012 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 MAP4K3Q8IVH8 894 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TMEM130Q8N3G9 435 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NXPE3Q969Y0 559 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SUSD3Q96L08 255 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 CLIC6Q96NY7 704 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 USP28Q96RU2 1077 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PRRX2Q99811 253 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 STRA6Q9BX79 667 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PIDD1Q9HB75 910 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 STK17AQ9UEE5 414 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TUBGCP4Q9UGJ1 667 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 STYXL1Q9Y6J8 313 aa14.92□□□□□ -0.02
TNFRSF1A-202ENST00000366159 K7ENM7 598 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 OGTO15294 1046 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PPP1R37O75864 691 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 CYP3A5P20815 502 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NMT1P30419 496 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 GBP2P32456 591 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NUBP1P53384 320 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NTHL1P78549 312 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SLC39A14Q15043 492 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ENOX2Q16206 610 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 KYAT1Q16773 422 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 PPM1LQ5SGD2 360 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 LIN9Q5TKA1 542 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ZNF720Q7Z2F6 126 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 GRASPQ7Z6J2 395 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SLC44A3Q8N4M1 653 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ZNF461Q8TAF7 563 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SLC7A14Q8TBB6 771 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 RSAD2Q8WXG1 361 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 SNX21Q969T3 373 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 DNAJC19Q96DA6 116 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 TSPAN18Q96SJ8 248 aa14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ZSCAN16Q9H4T2 348 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 CPSF3Q9UKF6 684 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ARHGEF37A1IGU5 675 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 WDR27A2RRH5 827 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 MYMKA6NI61 221 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 LACTBL1A8MY62 500 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ANKRD63C9JTQ0 380 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 M0QZQ0 153 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 HNRNPDLO14979 420 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 STX6O43752 255 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NARSO43776 548 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NPR3P17342 541 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ABCD1P33897 745 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 NASPP49321 788 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 AARSP49588 968 aaKnown RBP eCLIP14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 LIG4P49917 911 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ROR1Q01973 937 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ZC2HC1CQ53FD0 456 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 BICD1Q96G01 975 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 DNMT3BQ9UBC3 853 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 FBXL5Q9UKA1 691 aa14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 ZFP37Q9Y6Q3 630 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-202ENST00000366159 A0A087X0B3 334 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CCL16O15467 120 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 TBCAO75347 108 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ATF2P15336 505 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 FSHRP23945 695 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CEBPZQ03701 1054 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SPAG1Q07617 926 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 HTR4Q13639 388 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CWF19L1Q69YN2 538 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 TCEAL8Q8IYN2 117 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 TMEM105Q8N8V8 129 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms