RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ATF7IP2Q5U623 682 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 LRRC31Q6UY01 552 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 C15orf39Q6ZRI6 1047 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 ZNF467Q7Z7K2 595 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-202ENST00000358966 NLRP7Q8WX94 980 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 PIK3R5Q8WYR1 880 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 ALS2CR12Q96Q35 445 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 MANSC4A6NHS7 340 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-202ENST00000358966 GPR25O00155 361 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 P4HA2O15460 535 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 PPFIA4O75335 1185 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 CFHP08603 1231 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 SLC10A3P09131 477 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 CHRNB2P17787 502 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 TNFAIP3P21580 790 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 SLC26A2P50443 739 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 PTENP60484 403 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 KIF22Q14807 665 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 LLGL2Q6P1M3 1020 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 MTHFD1LQ6UB35 978 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 TLK2Q86UE8 772 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 CAGE1Q8TC20 777 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 LMBR1Q8WVP7 490 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 AGPAT1Q99943 283 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 CXCL16Q9H2A7 254 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 CDHR5Q9HBB8 845 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 SNX12Q9UMY4 172 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 TNPO2O14787 897 aaKnown RBP13.56□□□□□ -0.24
GGPS1-202ENST00000358966 MEFVO15553 781 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-202ENST00000358966 ZMYND10O75800 440 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 H2AFZP0C0S5 128 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 ZNF865P0CJ78 1059 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-202ENST00000358966 TFAMQ00059 246 aaKnown RBP13.56□□□□□ -0.24
GGPS1-202ENST00000358966 AP1ARQ63HQ0 302 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 H2AFVQ71UI9 128 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 VPS36Q86VN1 386 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 FAM71AQ8IYT1 594 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 SHC3Q92529 594 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 N4BP2L2Q92802 583 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-202ENST00000358966 OSBPL9Q96SU4 736 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 PNKPQ96T60 521 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 TACO1Q9BSH4 297 aaKnown RBP13.56□□□□□ -0.24
GGPS1-202ENST00000358966 NOCTQ9UK39 431 aaKnown RBP13.56□□□□□ -0.24
GGPS1-202ENST00000358966 NUB1Q9Y5A7 615 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 MYADML2A6NDP7 307 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 EFNA5P52803 228 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 DGKDQ16760 1214 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 SLFN12LQ6IEE8 588 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 SCARA5Q6ZMJ2 495 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 CPNE8Q86YQ8 564 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 FMNL3Q8IVF7 1028 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 GOLGA1Q92805 767 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 THOC1Q96FV9 657 aaKnown RBP13.56□□□□□ -0.24
GGPS1-202ENST00000358966 FUT8Q9BYC5 575 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 CDT1Q9H211 546 aa13.56□□□□□ -0.24
GGPS1-202ENST00000358966 CTAGE15A4D2H0 777 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 PHACTR2O75167 634 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 CTAGE8P0CG41 777 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 GUCY2FP51841 1108 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 TRIM32Q13049 653 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 ZNF394Q53GI3 561 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 CTAGE6Q86UF2 777 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 CREG2Q8IUH2 290 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 CTAGE4Q8IX94 777 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 KIAA0319LQ8IZA0 1049 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 EMID1Q96A84 441 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-202ENST00000358966 FZD8Q9H461 694 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 ANKZF1Q9H8Y5 726 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 C1orf112Q9NSG2 853 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 COG5Q9UP83 839 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 GNEQ9Y223 722 aaKnown RBP13.55□□□□□ -0.24
GGPS1-202ENST00000358966 TRIP11Q15643 1979 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 ACKR2O00590 384 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 AOC2O75106 756 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 CYP11B1P15538 503 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 ARF4P18085 180 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-202ENST00000358966 CCNHP51946 323 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-202ENST00000358966 MFAP3P55082 362 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 FMO1Q01740 532 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 ADCY2Q08462 1091 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 SKIDA1Q1XH10 827 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 ZPBP2Q6X784 338 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 RUFY4Q6ZNE9 571 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 PASD1Q8IV76 773 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 BTBD6Q96KE9 485 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 PARD6BQ9BYG5 372 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 TRIM6Q9C030 488 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-202ENST00000358966 GABRQQ9UN88 632 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 FTLP02792 175 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-202ENST00000358966 CD58P19256 250 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 MYL6P60660 151 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 NOP14P78316 857 aaKnown RBP13.55□□□□□ -0.24
GGPS1-202ENST00000358966 CLDN10P78369 228 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 NCOA4Q13772 614 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 AMHR2Q16671 573 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 WHAMMP3Q1A5X7 153 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 MPZL3Q6UWV2 235 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 USP37Q86T82 979 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 BRSK2Q8IWQ3 736 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms