RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PSMC4P43686 418 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 OSTNP61366 133 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 CDR2Q01850 454 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 PKN2Q16513 984 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 SMTNL2Q2TAL5 461 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 ARHGEF16Q5VV41 709 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 AP1ARQ63HQ0 302 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 APOBEC3HQ6NTF7 200 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 C11orf63Q6NUN7 778 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 ART4Q93070 314 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 TSC22D3Q99576 134 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 CALN1Q9BXU9 219 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 A1CFQ9NQ94 594 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 CPSF2Q9P2I0 782 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 UVRAGQ9P2Y5 699 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 PCSK1NQ9UHG2 260 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 PCYOX1Q9UHG3 505 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 VAV3Q9UKW4 847 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 PCDHA3Q9Y5H8 950 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 USH1CQ9Y6N9 552 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 GLI3P10071 1580 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 ENTPD5O75356 428 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 DCTN3O75935 186 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 STAT4Q14765 748 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 KIF22Q14807 665 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 BSPRYQ5W0U4 402 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 ACAD10Q6JQN1 1059 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 BZW1Q7L1Q6 419 aaKnown RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 PIGWQ7Z7B1 504 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 ZBTB33Q86T24 672 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 RHPN2Q8IUC4 686 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 CKAP2Q8WWK9 683 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 KCNH7Q9NS40 1196 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 LRRC4BQ9NT99 713 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 WRAP73Q9P2S5 460 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 PPP1R1BQ9UD71 204 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 MARCOQ9UEW3 520 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-203ENST00000358528 ZHX2Q9Y6X8 837 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 GAKO14976 1311 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 AFF2P51816 1311 aa6.97□□□□□ -1.29
CSDE1-203ENST00000358528 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 MT-ND3P03897 115 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 ADRB2P07550 413 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 KRT4P19013 534 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 GNA15P30679 374 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 FMO1Q01740 532 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 SPIRE1Q08AE8 756 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 TAF1BQ53T94 588 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 PCNX4Q63HM2 1172 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 DNAJC24Q6P3W2 148 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 CENPUQ71F23 418 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 MTDHQ86UE4 582 aaKnown RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 RHOT1Q8IXI2 618 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 SEMA4DQ92854 862 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 FAM163AQ96GL9 167 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 NAF1Q96HR8 494 aaKnown RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 TTC1Q99614 292 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 HSD17B14Q9BPX1 270 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 VCXQ9H320 206 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 DLGAP2Q9P1A6 1054 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 COL4A1P02462 1669 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 CYP3A7-CYP3A51PA0A087WV96 503 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 F5H423 210 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 RFX1P22670 979 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 CYP3A7P24462 503 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 DLGAP5Q15398 846 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 AOC3Q16853 763 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 LRRC36Q1X8D7 754 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 RC3H1Q5TC82 1133 aaKnown RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 SCYL2Q6P3W7 929 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 TMEM154Q6P9G4 183 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 ZDHHC14Q8IZN3 488 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 LENG9Q96B70 501 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 CFAP36Q96G28 342 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 MAGEB18Q96M61 343 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 KREMEN1Q96MU8 473 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 MAK16Q9BXY0 300 aaKnown RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 KIAA1683Q9H0B3 1180 aa6.96□□□□□ -1.29
CSDE1-203ENST00000358528 SAE1Q9UBE0 346 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 NXF1Q9UBU9 619 aaKnown RBP6.96□□□□□ -1.29
CSDE1-203ENST00000358528 KAT6AQ92794 2004 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 ADAMTSL3P82987 1691 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 ROBO1Q9Y6N7 1651 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 O00370 1275 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 PIK3R2O00459 728 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 ZBED4O75132 1171 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 HAUS5O94927 633 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 INHBAP08476 426 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 CTCFP49711 727 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-203ENST00000358528 POU5F1Q01860 360 aaKnown RBP6.96□□□□□ -1.3
CSDE1-203ENST00000358528 TRPC3Q13507 836 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 WLSQ5T9L3 541 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 RASIP1Q5U651 963 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 CC2D2BQ6DHV5 1058 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 MOXD1Q6UVY6 613 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 SV2AQ7L0J3 742 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 ECHDC2Q86YB7 292 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 RFX6Q8HWS3 928 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 TTC8Q8TAM2 541 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms