RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PLXNA4Q9HCM2 1894 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 DDHD2O94830 711 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 TPM2P07951 284 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 ZNF18P17022 549 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 GUCY2FP51841 1108 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 AP3M2P53677 418 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 CLDN10P78369 228 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 SOX4Q06945 474 aaPredicted RBP16.48■□□□□ 0.23
TPM1-206ENST00000358278 BIRC3Q13489 604 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 NAB2Q15742 525 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 ZBTB6Q15916 424 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 SLC35C1Q96A29 364 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 HSD3B7Q9H2F3 369 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 NRDE2Q9H7Z3 1164 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 DPP3Q9NY33 737 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 R3HCC1Q9Y3T6 440 aaKnown RBP16.48■□□□□ 0.23
TPM1-206ENST00000358278 PCDHA11Q9Y5I1 949 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 MRPL42Q9Y6G3 142 aaKnown RBP16.48■□□□□ 0.23
TPM1-206ENST00000358278 LCHNA4D1U4 455 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 PES1O00541 588 aaKnown RBP16.47■□□□□ 0.23
TPM1-206ENST00000358278 MYOGP15173 224 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 CYP3A5P20815 502 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 GCLMP48507 274 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 DSC1Q08554 894 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 RAB30Q15771 203 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 MAN2A1Q16706 1144 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 C1orf220Q5T0J3 134 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 COLGALT2Q8IYK4 626 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 SP7Q8TDD2 431 aaPredicted RBP16.47■□□□□ 0.23
TPM1-206ENST00000358278 UROC1Q96N76 676 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 TUBGCP2Q9BSJ2 902 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 CWH43Q9H720 699 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 CACNG4Q9UBN1 327 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 DNAJB4Q9UDY4 337 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 MSRAQ9UJ68 235 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 COLQQ9Y215 455 aaPredicted RBP16.47■□□□□ 0.23
TPM1-206ENST00000358278 TRANK1O15050 2925 aa16.47■□□□□ 0.23
TPM1-206ENST00000358278 A0A1W2PPC1 479 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 B4GALT3O60512 393 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 PHACTR2O75167 634 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 CLSTN1O94985 981 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 ITGB3P05106 788 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 KRT19P08727 400 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 ATP1A3P13637 1013 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 GTF2H1P32780 548 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 OR1G1P47890 313 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 MXI1P50539 228 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 PPP3CAQ08209 521 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 TRAPPC11Q7Z392 1133 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 C1orf127Q8N9H9 656 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 ZNF516Q92618 1163 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 PBX4Q9BYU1 374 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 ITGA11Q9UKX5 1188 aa16.46■□□□□ 0.23
TPM1-206ENST00000358278 N4BP1O75113 896 aaKnown RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 AFPP02771 609 aaKnown RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 CA3P07451 260 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 LAG3P18627 525 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 PBX2P40425 430 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 ALDH7A1P49419 539 aaKnown RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 CLCNKBP51801 687 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 KCNH2Q12809 1159 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 KRT31Q15323 416 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 TDRD10Q5VZ19 366 aaKnown RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 SV2AQ7L0J3 742 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 TMEM130Q8N3G9 435 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 PAAF1Q9BRP4 392 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 TMEM175Q9BSA9 504 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 TMEM8AQ9HCN3 771 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 AAASQ9NRG9 546 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 TAB2Q9NYJ8 693 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 PRG3Q9Y2Y8 225 aaPredicted RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 PODXLO00592 558 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 ALDH2P05091 517 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 POLR2BP30876 1174 aaKnown RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 RPL9P32969 192 aaKnown RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 PBX3P40426 434 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 PIK3CAP42336 1068 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 BCAR1P56945 870 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 MCCD1P59942 119 aaPredicted RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 MYL7Q01449 175 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 TRPC3Q13507 836 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 ZACNQ401N2 412 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 KRT39Q6A163 491 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 GAS2L3Q86XJ1 694 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 RABGGTAQ92696 567 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 DDX27Q96GQ7 796 aaKnown RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 ZNF558Q96NG5 402 aa16.45■□□□□ 0.22
TPM1-206ENST00000358278 YBX2Q9Y2T7 364 aaKnown RBP16.45■□□□□ 0.22
TPM1-206ENST00000358278 VWA8A3KMH1 1905 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 LINC01553A4QN01 128 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 CARNS1A5YM72 827 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 C4BPAP04003 597 aaKnown RBP16.44■□□□□ 0.22
TPM1-206ENST00000358278 LRPAP1P30533 357 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 SLC11A1P49279 550 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 FMO5P49326 533 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 CETN1Q12798 172 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 UPP1Q16831 310 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 CBWD6Q4V339 395 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 CBWD3Q5JTY5 395 aa16.44■□□□□ 0.22
TPM1-206ENST00000358278 CBWD5Q5RIA9 395 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms