RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 C11orf70Q9BRQ4 267 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 ABCB11O95342 1321 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 PLA2G4AP47712 749 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 ZNF699Q32M78 642 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 RASGRP2Q7LDG7 609 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 ZNF589Q86UQ0 364 aaPredicted RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 ASAP3Q8TDY4 903 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 ZNF483Q8TF39 744 aaPredicted RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 VCPKMTQ9H867 229 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 H2AFYO75367 372 aaKnown RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 RHOBTB1O94844 696 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 ARIH2O95376 493 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 DRAP1Q14919 205 aaPredicted RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 ZNF568Q3ZCX4 644 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 FRMD5Q7Z6J6 570 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 MMGT1Q8N4V1 131 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 AIPL1Q9NZN9 384 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 LIMA1Q9UHB6 759 aaKnown RBP13.48□□□□□ -0.25
SMC4-202ENST00000357388 AMACRQ9UHK6 382 aa13.48□□□□□ -0.25
SMC4-202ENST00000357388 TRPC5OSA6NMA1 111 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 RINLQ6ZS11 566 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 PDCD6IPQ8WUM4 868 aaKnown RBP13.47□□□□□ -0.25
SMC4-202ENST00000357388 LRRC39Q96DD0 335 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 FRMD8Q9BZ67 464 aaPredicted RBP13.47□□□□□ -0.25
SMC4-202ENST00000357388 EPC1Q9H2F5 836 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 CAAP1Q9H8G2 361 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 SEC31BQ9NQW1 1179 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 RALAP11233 206 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 PSMC3P17980 439 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 GPC3P51654 580 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 COPAP53621 1224 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 JADE3Q92613 823 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 RIC8BQ9NVN3 520 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 GUCA1CO95843 209 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 MYL2P10916 166 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 ZNF200P98182 395 aaPredicted RBP13.47□□□□□ -0.25
SMC4-202ENST00000357388 COASYQ13057 564 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 KCNB1Q14721 858 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
SMC4-202ENST00000357388 TTC30BQ8N4P2 665 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 NDEL1Q9GZM8 345 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 PAPOLBQ9NRJ5 636 aaKnown RBP13.47□□□□□ -0.25
SMC4-202ENST00000357388 RFX7Q2KHR2 1363 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 CYBBP04839 570 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 PSMA4P25789 261 aaKnown RBP13.47□□□□□ -0.25
SMC4-202ENST00000357388 PRELPP51888 382 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 STX5Q13190 355 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 CTTNQ14247 550 aaKnown RBP13.47□□□□□ -0.25
SMC4-202ENST00000357388 TTC39BQ5VTQ0 682 aaPredicted RBP13.47□□□□□ -0.25
SMC4-202ENST00000357388 SUGP1Q8IWZ8 645 aaKnown RBP13.47□□□□□ -0.25
SMC4-202ENST00000357388 LCORLQ8N3X6 602 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 AFG1LQ8WV93 481 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 CNDP1Q96KN2 507 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 ISCUQ9H1K1 167 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 DCLRE1BQ9H816 532 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 GRID1Q9ULK0 1009 aa13.47□□□□□ -0.25
SMC4-202ENST00000357388 PDZK1P1A8MUH7 402 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 SLC16A3O15427 465 aaKnown RBP13.46□□□□□ -0.25
SMC4-202ENST00000357388 VAMP7P51809 220 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 IYDQ6PHW0 289 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 PRPF39Q86UA1 669 aaKnown RBP13.46□□□□□ -0.25
SMC4-202ENST00000357388 BHMT2Q9H2M3 363 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 TNPO2O14787 897 aaKnown RBP13.46□□□□□ -0.25
SMC4-202ENST00000357388 ASNA1O43681 348 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 FKBP6O75344 327 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 GH2P01242 217 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 KCNK10P57789 538 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 UBE2SQ16763 222 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 CYFIP1Q7L576 1253 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 ARHGAP22Q7Z5H3 698 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 FAM210AQ96ND0 272 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 SERPINB12Q96P63 405 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 WDR24Q96S15 920 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 VPS33BQ9H267 617 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 ASB14A6NK59 587 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 PSMD14O00487 310 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 GNA15P30679 374 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 P3H1Q32P28 736 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 SFR1Q86XK3 245 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
SMC4-202ENST00000357388 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 RBM15Q96T37 977 aaKnown RBP eCLIP13.46□□□□□ -0.255e-67■■■■■ 212.6
SMC4-202ENST00000357388 ALDH8A1Q9H2A2 487 aaPredicted RBP13.46□□□□□ -0.25
SMC4-202ENST00000357388 MANSC1Q9H8J5 431 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 SP110Q9HB58 689 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 SYTL2Q9HCH5 934 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 HERC5Q9UII4 1024 aaKnown RBP13.46□□□□□ -0.25
SMC4-202ENST00000357388 PCDHB8Q9UN66 801 aa13.46□□□□□ -0.25
SMC4-202ENST00000357388 TK2O00142 265 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 TRAPPC3O43617 180 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 SNRPAP09012 282 aaKnown RBP13.46□□□□□ -0.26
SMC4-202ENST00000357388 SERPINB8P50452 374 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 KCNV1Q6PIU1 500 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 TMEM270Q6UE05 265 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 MFN1Q8IWA4 741 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 WRNIP1Q96S55 665 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms