RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 USP17L12C9JPN9 530 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 USP17L21D6R901 530 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 WDR47O94967 919 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 PSMC3P17980 439 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 CARSP49589 748 aaKnown RBP6.9□□□□□ -1.31
VPS13B-202ENST00000357162 KYAT3Q6YP21 454 aaKnown RBP6.9□□□□□ -1.31
VPS13B-202ENST00000357162 BDH2Q9BUT1 245 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 PCDHB2Q9Y5E7 798 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 TDRD6O60522 2096 aaKnown RBP6.9□□□□□ -1.31
VPS13B-202ENST00000357162 KCNQ3O43525 872 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 NCF2P19878 526 aaPredicted RBP6.9□□□□□ -1.31
VPS13B-202ENST00000357162 ADSSL1Q8N142 457 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 PDPRQ8NCN5 879 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 RDM1Q8NG50 284 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 AASDHPPTQ9NRN7 309 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 NMRK1Q9NWW6 199 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 TSHRP16473 764 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 MAPK1P28482 360 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 TIMM10P62072 90 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 BSPRYQ5W0U4 402 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 TMPRSS6Q8IU80 811 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 SIX6OS1Q8N1H7 587 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 LRRC59Q96AG4 307 aaKnown RBP6.9□□□□□ -1.31
VPS13B-202ENST00000357162 FAF2Q96CS3 445 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 CHAMP1Q96JM3 812 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 EFR3BQ9Y2G0 817 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 PIKFYVEQ9Y2I7 2098 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 PTPRQQ9UMZ3 2332 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 H0Y3Z8 333 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 TRAPPC3O43617 180 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 POLGP54098 1239 aaPredicted RBP6.9□□□□□ -1.31
VPS13B-202ENST00000357162 CCNA1P78396 465 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 ROR1Q01973 937 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 GPS1Q13098 491 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF827Q17R98 1081 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 JAMLQ86YT9 394 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 SH3TC2Q8TF17 1288 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 GLG1Q92896 1179 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 PGBD1Q96JS3 809 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 ILKAPQ9H0C8 392 aaPredicted RBP6.9□□□□□ -1.31
VPS13B-202ENST00000357162 ZFYVE16Q7Z3T8 1539 aa6.9□□□□□ -1.31
VPS13B-202ENST00000357162 MED26O95402 600 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 RAD54LQ92698 747 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 CNGB3Q9NQW8 809 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 GPHNQ9NQX3 736 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 THRAP10827 490 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 RPL5P46777 297 aaKnown RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 GRM4Q14833 912 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 TRIP10Q15642 601 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 KCNV1Q6PIU1 500 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 S100ZQ8WXG8 99 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 PSMC1P62191 440 aaKnown RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 MTFR1Q15390 333 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 NFRKBQ6P4R8 1299 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 NELFCDQ8IXH7 590 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 CLK1P49759 484 aaKnown RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 DPYDQ12882 1025 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 MTERF3Q96E29 417 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 PDE9AO76083 593 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 BCAR1P56945 870 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 DYMQ7RTS9 669 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 ADCK1Q86TW2 530 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 KYQ8NBH2 561 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 FAM81AQ8TBF8 368 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 GAS2O43903 313 aaKnown RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 FTCDO95954 541 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 RALBP11234 206 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 ST13P50502 369 aaKnown RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 NR5A1Q13285 461 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 SPANXN2Q5MJ10 180 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 NOA1Q8NC60 698 aaKnown RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 VTI1BQ9UEU0 232 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 KIF26BQ2KJY2 2108 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 APOL1O14791 398 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 TRIM24O15164 1050 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 LSM8O95777 96 aaKnown RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 ALBP02768 609 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 TOB2Q14106 344 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF556Q9HAH1 456 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 MYO3BQ8WXR4 1341 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 SPRP35270 261 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 RPS6KA3P51812 740 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 TC2NQ8N9U0 490 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 ASB2Q96Q27 587 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 SLC8A2Q9UPR5 921 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 WDR91A4D1P6 747 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 TMEM191CA6NGB0 347 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 POTECB2RU33 542 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 PRR23D1E9PI22 279 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 ZMYND10O75800 440 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 CAPN15O75808 1086 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 PRR23D2P0DMB1 279 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-202ENST00000357162 USH1GQ495M9 461 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 BARGINQ6ZT62 677 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 HDDC2Q7Z4H3 204 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 DAGLBQ8NCG7 672 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 FAM102BQ5T8I3 360 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 ASAP3Q8TDY4 903 aa6.89□□□□□ -1.31
VPS13B-202ENST00000357162 FSD1LQ9BXM9 530 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms