RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 CCT7Q99832 543 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 PRMT1Q99873 361 aaKnown RBP12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 MUC3BQ9H195 1237 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 SEC31BQ9NQW1 1179 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 IP6K2Q9UHH9 426 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 PRG3Q9Y2Y8 225 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 AKAP10O43572 662 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 ITIH2P19823 946 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 KCNB1Q14721 858 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 TMEM35BQ8NCS4 154 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 SH3TC2Q8TF17 1288 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 DDX50Q9BQ39 737 aaKnown RBP12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 DHX36Q9H2U1 1008 aaKnown RBP12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 KCNF1Q9H3M0 494 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 TLR7Q9NYK1 1049 aaKnown RBP12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 STAP1Q9ULZ2 295 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 CPSF1Q10570 1443 aaKnown RBP12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 KCNN4O15554 427 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 HPCAP84074 193 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 TAP1Q03518 808 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 ENOSF1Q7L5Y1 443 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 ZNF589Q86UQ0 364 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 RAVER2Q9HCJ3 691 aaKnown RBP12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 CDK8P49336 464 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 KDSRQ06136 332 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 NAA30Q147X3 362 aaPredicted RBP12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 FLCNQ8NFG4 579 aa12.07□□□□□ -0.48
SPTBN1-202ENST00000356805 CCDC80Q76M96 950 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 C10orf53Q8N6V4 93 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 AGAP3Q96P47 875 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ETAA1Q9NY74 926 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 AATKQ6ZMQ8 1374 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 FKBP9O95302 570 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 CDC27P30260 824 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 SLC1A1P43005 524 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 WLSQ5T9L3 541 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ZNF746Q6NUN9 644 aaPredicted RBP12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 FKBP9P1Q75LS8 142 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 CROCCP3Q8IVE0 287 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 TRABDQ9H4I3 376 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 KIAA1586Q9HCI6 787 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 PKP3Q9Y446 797 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ANKMY2Q8IV38 441 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 GUF1Q8N442 669 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ZBTB10Q96DT7 871 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 SPATA33Q96N06 139 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 C11orf70Q9BRQ4 267 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 CNPY3Q9BT09 278 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 PCDHA6Q9UN73 950 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 PCDHA8Q9Y5H6 950 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 TTC37Q6PGP7 1564 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 PHKG2P15735 406 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ADD2P35612 726 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ALDH6A1Q02252 535 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 C6orf10Q5SRN2 563 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ARHGAP17Q68EM7 881 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 EFHBQ8N7U6 833 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 GHRP10912 638 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 EPB42P16452 691 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 HDDC2Q7Z4H3 204 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 SCFD1Q8WVM8 642 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ELMO2Q96JJ3 720 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 SLAIN2Q9P270 581 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 LRCH1Q9Y2L9 728 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 E2F8A0AVK6 867 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 CYBBP04839 570 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ST8SIA6P61647 398 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 SGO1Q5FBB7 561 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 ERP27Q96DN0 273 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 OSBPL8Q9BZF1 889 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 OLFML3Q9NRN5 406 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 TTC26A0AVF1 554 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 PRELPP51888 382 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 MRPL1Q9BYD6 325 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 MRPS26Q9BYN8 205 aaKnown RBP12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 CARD9Q9H257 536 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 KLHL11Q9NVR0 708 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 V9GYQ6 96 aa12.06□□□□□ -0.48
SPTBN1-202ENST00000356805 TBXAS1P24557 533 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 SULT1E1P49888 294 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 RPS6P62753 249 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 SFSWAPQ12872 951 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 ALFQ53S48 1182 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 SPATA2LQ8IUW3 424 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 ATL2Q8NHH9 583 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 GTF2A1LQ9UNN4 478 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 ATP1A1P05023 1023 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 MLH1P40692 756 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 VAMP7P51809 220 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 PCSK7Q16549 785 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 DDX47Q9H0S4 455 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 ZSWIM5Q9P217 1185 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 LIMA1Q9UHB6 759 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.487e-7■■■■■ 34.1
SPTBN1-202ENST00000356805 ZBTB22O15209 634 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 NR3C1P04150 777 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 TRIP10Q15642 601 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms