RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 NFE2L3Q9Y4A8 694 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 CASTOR2A6NHX0 329 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 SMTNL1A8MU46 457 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 CITO14578 2027 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 SLC11A1P49279 550 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 SOX4Q06945 474 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-201ENST00000356017 UPP1Q16831 310 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 EPC2Q52LR7 807 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 DCLRE1AQ6PJP8 1040 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 C11orf84Q9BUA3 381 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-201ENST00000356017 TUBGCP4Q9UGJ1 667 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 ITGA11Q9UKX5 1188 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 R3HCC1Q9Y3T6 440 aaKnown RBP16.81■□□□□ 0.28
TRIM13-201ENST00000356017 LRRIQ3A6PVS8 624 aaPredicted RBP16.8■□□□□ 0.28
TRIM13-201ENST00000356017 B4GALT3O60512 393 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 B3GAT3O94766 335 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 ARHGEF15O94989 841 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 PAX3P23760 479 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 GTF2H1P32780 548 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 CLCNKBP51801 687 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 KRT17Q04695 432 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 GPR153Q6NV75 609 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 LRSAM1Q6UWE0 723 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 SLC39A11Q8N1S5 342 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 PLEKHO2Q8TD55 490 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 TMEM169Q96HH4 297 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 POP1Q99575 1024 aaKnown RBP16.8■□□□□ 0.28
TRIM13-201ENST00000356017 C17orf80Q9BSJ5 609 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 MTMR12Q9C0I1 747 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 ZNF576Q9H609 170 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 GOLGA2P5Q9HBQ8 144 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
TRIM13-201ENST00000356017 RALGAPA2Q2PPJ7 1873 aa16.8■□□□□ 0.28
TRIM13-201ENST00000356017 TMEM189-UBE2V1I3L0A0 370 aa16.79■□□□□ 0.28
TRIM13-201ENST00000356017 PODXLO00592 558 aa16.79■□□□□ 0.28
TRIM13-201ENST00000356017 DLG4P78352 724 aa16.79■□□□□ 0.28
TRIM13-201ENST00000356017 TCERG1LQ5VWI1 586 aa16.79■□□□□ 0.28
TRIM13-201ENST00000356017 LMBRD2Q68DH5 695 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-201ENST00000356017 FBXO22Q8NEZ5 403 aa16.79■□□□□ 0.28
TRIM13-201ENST00000356017 OR5B17Q8NGF7 314 aa16.79■□□□□ 0.28
TRIM13-201ENST00000356017 IGSF21Q96ID5 467 aa16.79■□□□□ 0.28
TRIM13-201ENST00000356017 PUF60Q9UHX1 559 aaKnown RBP16.79■□□□□ 0.28
TRIM13-201ENST00000356017 MTUS1Q9ULD2 1270 aa16.79■□□□□ 0.28
TRIM13-201ENST00000356017 PRG3Q9Y2Y8 225 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-201ENST00000356017 LAMA3Q16787 3333 aa16.79■□□□□ 0.28
TRIM13-201ENST00000356017 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
TRIM13-201ENST00000356017 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 BECN2A8MW95 431 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 NT5C1B-RDH14C9J2C7 533 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 SOX1O00570 391 aaPredicted RBP16.78■□□□□ 0.28
TRIM13-201ENST00000356017 TRAPPC3O43617 180 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 TADA2AO75478 443 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 FGF18O76093 207 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 PBX3P40426 434 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 PNPLA4P41247 253 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 ZNF445P59923 1031 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 RBP5P82980 135 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 PLCB3Q01970 1234 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
TRIM13-201ENST00000356017 C9orf57Q5W0N0 161 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 TRAPPC11Q7Z392 1133 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 CREBRFQ8IUR6 639 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 C1orf127Q8N9H9 656 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 KLHL23Q8NBE8 558 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 CNOT6LQ96LI5 555 aaKnown RBP16.78■□□□□ 0.28
TRIM13-201ENST00000356017 PAAF1Q9BRP4 392 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 ADAM28Q9UKQ2 775 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 NUB1Q9Y5A7 615 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 PTPRJQ12913 1337 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 TDRD15B5MCY1 1934 aaKnown RBP16.78■□□□□ 0.28
TRIM13-201ENST00000356017 H3BNC9 293 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 PIRO00625 290 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 PHACTR2O75167 634 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 ITGB3P05106 788 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 EEF1GP26641 437 aaKnown RBP16.78■□□□□ 0.28
TRIM13-201ENST00000356017 UBE3AQ05086 875 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 ELAVL2Q12926 359 aaKnown RBP16.78■□□□□ 0.28
TRIM13-201ENST00000356017 ZACNQ401N2 412 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 ZNF697Q5TEC3 545 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 IRF2BP1Q8IU81 584 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 TRIM59Q8IWR1 403 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 AOPEPQ8N6M6 819 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 LRRC52Q8N7C0 313 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 ARNTL2Q8WYA1 636 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 ZNF516Q92618 1163 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 SLC35C1Q96A29 364 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 TSPY26PQ9H489 355 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 TMEM8AQ9HCN3 771 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 SAMSN1Q9NSI8 373 aaKnown RBP16.78■□□□□ 0.28
TRIM13-201ENST00000356017 FANCLQ9NW38 375 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 LZTS1Q9Y250 596 aa16.78■□□□□ 0.28
TRIM13-201ENST00000356017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRIM13-201ENST00000356017 SF3B1O75533 1304 aaKnown RBP eCLIP16.77■□□□□ 0.27
TRIM13-201ENST00000356017 KIF4AO95239 1232 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 C4BPAP04003 597 aaKnown RBP16.77■□□□□ 0.27
TRIM13-201ENST00000356017 KRT19P08727 400 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 TRIM49P0CI25 452 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 TRIM49CP0CI26 452 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 GUCY2FP51841 1108 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 BIRC3Q13489 604 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms