RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 TRAPPC11Q7Z392 1133 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 WDR75Q8IWA0 830 aaKnown RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 CFAP61Q8NHU2 1237 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 FIS1Q9Y3D6 152 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 PDHXO00330 501 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 B3GAT3O94766 335 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 IL1RL1Q01638 556 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 CREMQ03060 361 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 PDCD2Q16342 344 aaPredicted RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 MYRIPQ8NFW9 859 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 THEGQ9P2T0 379 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 FBXL21Q9UKT6 434 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 RAB23Q9ULC3 237 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 LRRIQ3A6PVS8 624 aaPredicted RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 HSPA4LO95757 839 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 FTLP02792 175 aaPredicted RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 SNRNP35Q16560 246 aaKnown RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 RABGAP1LQ5R372 815 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 ALS2CLQ60I27 953 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 EXT2Q93063 718 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 ZKSCAN4Q969J2 545 aaPredicted RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 CAPS2Q9BXY5 557 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 NDEL1Q9GZM8 345 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 SPATC1LQ9H0A9 340 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 ABHD16BQ9H3Z7 469 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 MRGBPQ9NV56 204 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 DEUP1Q05D60 604 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 C4orf22Q6V702 233 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 ZNF677Q86XU0 584 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 NKX2-3Q8TAU0 364 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 DDX27Q96GQ7 796 aaKnown RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 SAMSN1Q9NSI8 373 aaKnown RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 C10orf120Q5SQS8 335 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 GMCL1Q96IK5 515 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 HNRNPCL2B2RXH8 293 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 HNRNPCL1O60812 293 aaKnown RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 AKR1A1P14550 325 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 NAMPTP43490 491 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 OAZ1P54368 228 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 GMCL1P1Q8NEA9 526 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 RIN2Q8WYP3 895 aaPredicted RBP11.88□□□□□ -0.51
FN1-204ENST00000356005 DPF2Q92785 391 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 STK38LQ9Y2H1 464 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 PKP3Q9Y446 797 aa11.88□□□□□ -0.51
FN1-204ENST00000356005 COPEO14579 308 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 TLR2O60603 784 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 XYLBO75191 536 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 NPTXRO95502 500 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 PPATQ06203 517 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 UBQLN1Q9UMX0 589 aaKnown RBP11.87□□□□□ -0.51
FN1-204ENST00000356005 NDUFS3O75489 264 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 BAG2O95816 211 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 LHX1P48742 406 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 ACTR2P61160 394 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 UGP2Q16851 508 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 CES5AQ6NT32 575 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 UGT3A1Q6NUS8 523 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 VSTM4Q8IW00 320 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 TMEM8AQ9HCN3 771 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 RGL1Q9NZL6 768 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 RSPH10B2B2RC85 870 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 RSPH10BP0C881 870 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 IRF1P10914 325 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 CACNB2Q08289 660 aaPredicted RBP11.87□□□□□ -0.51
FN1-204ENST00000356005 TOB2Q14106 344 aaPredicted RBP11.87□□□□□ -0.51
FN1-204ENST00000356005 RASSF3Q86WH2 238 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 ATG4CQ96DT6 458 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 C11orf70Q9BRQ4 267 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 STK33Q9BYT3 514 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 MFSD1Q9H3U5 465 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 NSMCE4AQ9NXX6 385 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 L3MBTL1Q9Y468 752 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 H0Y626 953 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 IFNAR2P48551 515 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 GEMIN4P57678 1058 aaKnown RBP11.87□□□□□ -0.51
FN1-204ENST00000356005 RBBP7Q16576 425 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 SYDE1Q6ZW31 735 aaPredicted RBP11.87□□□□□ -0.51
FN1-204ENST00000356005 RCOR2Q8IZ40 523 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 INTS2Q9H0H0 1204 aaKnown RBP11.87□□□□□ -0.51
FN1-204ENST00000356005 ABI2Q9NYB9 513 aaPredicted RBP11.87□□□□□ -0.51
FN1-204ENST00000356005 FAM208AQ9UK61 1670 aaKnown RBP11.87□□□□□ -0.51
FN1-204ENST00000356005 SPARCL1Q14515 664 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 TMEM199Q8N511 208 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 AIPL1Q9NZN9 384 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 PDGFRBP09619 1106 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 ACOT2P49753 483 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 NPEPPSP55786 919 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 ELOA2Q8IYF1 753 aaPredicted RBP11.87□□□□□ -0.51
FN1-204ENST00000356005 C1QTNF7Q9BXJ2 289 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 SLC30A1Q9Y6M5 507 aa11.87□□□□□ -0.51
FN1-204ENST00000356005 PQBP1O60828 265 aaKnown RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 CYP2C8P10632 490 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 RCN2Q14257 317 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 NFE2Q16621 373 aaPredicted RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 DEFB115Q30KQ5 88 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 KCNH7Q9NS40 1196 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 KIAA1257Q9ULG3 409 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 AKAP12Q02952 1782 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms