RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ETNK2Q9NVF9 386 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 TBK1Q9UHD2 729 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 STXBP5LQ9Y2K9 1186 aa9.98□□□□□ -0.81
SMG6-202ENST00000354901 BTNL10A8MVZ5 291 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 SNX3O60493 162 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 SORBS3O60504 671 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 DR1Q01658 176 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 STXBP4Q6ZWJ1 553 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 RBM12BQ8IXT5 1001 aaKnown RBP9.97□□□□□ -0.81
SMG6-202ENST00000354901 DAW1Q8N136 415 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 IL31RAQ8NI17 732 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 MIPOL1Q8TD10 442 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 LRRC8CQ8TDW0 803 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 C18orf8Q96DM3 657 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 KIFC3Q9BVG8 833 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 GPR88Q9GZN0 384 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 TMEM39BQ9GZU3 492 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 KLHL14Q9P2G3 628 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 ALG6Q9Y672 507 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 ZNF646O15015 1829 aaPredicted RBP9.97□□□□□ -0.81
SMG6-202ENST00000354901 PSME4Q14997 1843 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 EIF3DO15371 548 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMG6-202ENST00000354901 CYP3A4P08684 503 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 CREB1P16220 341 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 CALB2P22676 271 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 SP4Q02446 784 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 CFAP157Q5JU67 520 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 TMC3Q7Z5M5 1100 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 SLFN11Q7Z7L1 901 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 SLC30A5Q8TAD4 765 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 NMD3Q96D46 503 aaKnown RBP9.97□□□□□ -0.81
SMG6-202ENST00000354901 SERPINA10Q9UK55 444 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 DAAM1Q9Y4D1 1078 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 SLC16A4O15374 487 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 OPHN1O60890 802 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 TMEM253P0C7T8 217 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 KCNJ1P48048 391 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMG6-202ENST00000354901 SLC5A5Q92911 643 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 HIC2Q96JB3 615 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 RAB3IPQ96QF0 476 aaPredicted RBP9.97□□□□□ -0.81
SMG6-202ENST00000354901 VCX3BQ9H321 246 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 VCX3AQ9NNX9 186 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 NMRK1Q9NWW6 199 aa9.97□□□□□ -0.81
SMG6-202ENST00000354901 FRMPD4Q14CM0 1322 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 GTPBP10A4D1E9 387 aaKnown RBP9.96□□□□□ -0.81
SMG6-202ENST00000354901 YDJCA8MPS7 323 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 NFIBO00712 420 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 DDX3YO15523 660 aaKnown RBP9.96□□□□□ -0.81
SMG6-202ENST00000354901 MAFGO15525 162 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 SGPL1O95470 568 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 ZBTB48P10074 688 aaPredicted RBP9.96□□□□□ -0.81
SMG6-202ENST00000354901 MYCLP12524 364 aaPredicted RBP9.96□□□□□ -0.81
SMG6-202ENST00000354901 ALAS1P13196 640 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 ITGB5P18084 799 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 PEX3P56589 373 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 EN1Q05925 392 aaPredicted RBP9.96□□□□□ -0.81
SMG6-202ENST00000354901 PPP2R5CQ13362 524 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 SLC29A2Q14542 456 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 OLIG1Q8TAK6 271 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 FBXO25Q8TCJ0 367 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 STK32AQ8WU08 396 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 CYTH2Q99418 400 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 POP1Q99575 1024 aaKnown RBP9.96□□□□□ -0.81
SMG6-202ENST00000354901 AGPAT1Q99943 283 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 CCPG1Q9ULG6 757 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 SLC4A7Q9Y6M7 1214 aa9.96□□□□□ -0.81
SMG6-202ENST00000354901 CCDC169A6NNP5 214 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 CYP26A1O43174 497 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 CBX6O95503 412 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 EIF2AK2P19525 551 aaKnown RBP9.96□□□□□ -0.82
SMG6-202ENST00000354901 YY1P25490 414 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 VAMP7P51809 220 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 NPEPPSP55786 919 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 SOX10P56693 466 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 RCN1Q15293 331 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 EPC2Q52LR7 807 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 BTNL9Q6UXG8 535 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 MRRFQ96E11 262 aaKnown RBP9.96□□□□□ -0.82
SMG6-202ENST00000354901 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 IQCGQ9H095 443 aaKnown RBP9.96□□□□□ -0.82
SMG6-202ENST00000354901 SLITRK6Q9H5Y7 841 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 ZWILCHQ9H900 591 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 KCNH7Q9NS40 1196 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 LARSQ9P2J5 1176 aaKnown RBP9.96□□□□□ -0.82
SMG6-202ENST00000354901 TCEAL9Q9UHQ7 104 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 NENFQ9UMX5 172 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 MRPL11Q9Y3B7 192 aaKnown RBP9.96□□□□□ -0.82
SMG6-202ENST00000354901 SLX4Q8IY92 1834 aa9.96□□□□□ -0.82
SMG6-202ENST00000354901 COL2A1P02458 1487 aaPredicted RBP9.96□□□□□ -0.82
SMG6-202ENST00000354901 A0A0A6YYK5 440 aaPredicted RBP9.95□□□□□ -0.82
SMG6-202ENST00000354901 ASAP2O43150 1006 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 SLC26A4O43511 780 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 PEX11AO75192 247 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 TPBGLP0DKB5 382 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 BCRP11274 1271 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 GM2AP17900 193 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 MAPK7Q13164 816 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 C2CD6Q53TS8 623 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 PLA2G4FQ68DD2 849 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms