RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 TLR3O15455 904 aaKnown RBP16.8■□□□□ 0.28
CTSA-202ENST00000354880 PQBP1O60828 265 aaKnown RBP16.8■□□□□ 0.28
CTSA-202ENST00000354880 NDUFA10O95299 355 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 PNMA6AP0CW24 399 aaPredicted RBP16.8■□□□□ 0.28
CTSA-202ENST00000354880 FERP16591 822 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 CYLC1P35663 651 aaPredicted RBP16.8■□□□□ 0.28
CTSA-202ENST00000354880 NOP14P78316 857 aaKnown RBP16.8■□□□□ 0.28
CTSA-202ENST00000354880 KLHL30Q0D2K2 578 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 SPOPLQ6IQ16 392 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 ALKAL1Q6UXT8 129 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 SLC39A5Q6ZMH5 540 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 ENOSF1Q7L5Y1 443 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 C1orf127Q8N9H9 656 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 KREMEN1Q96MU8 473 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 CNTN3Q9P232 1028 aa16.8■□□□□ 0.28
CTSA-202ENST00000354880 BZW2Q9Y6E2 419 aaKnown RBP16.8■□□□□ 0.28
CTSA-202ENST00000354880 KIAA0100Q14667 2235 aaKnown RBP16.79■□□□□ 0.28
CTSA-202ENST00000354880 SSU72P8A0A1W2PR75 194 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 FOXN3O00409 490 aaPredicted RBP16.79■□□□□ 0.28
CTSA-202ENST00000354880 GFPT2O94808 682 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 ASS1P00966 412 aaKnown RBP16.79■□□□□ 0.28
CTSA-202ENST00000354880 SELPP16109 830 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 EIF4A3P38919 411 aaKnown RBP16.79■□□□□ 0.28
CTSA-202ENST00000354880 PRKCIP41743 596 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 MYL6P60660 151 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
CTSA-202ENST00000354880 MBTPS1Q14703 1052 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 SGSM1Q2NKQ1 1148 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 SCARA3Q6AZY7 606 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 LRRC8DQ7L1W4 858 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 ANKRD33Q7Z3H0 272 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 HACE1Q8IYU2 909 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 CCAR2Q8N163 923 aaKnown RBP16.79■□□□□ 0.28
CTSA-202ENST00000354880 ANKLE1Q8NAG6 615 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 DESI2Q9BSY9 194 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 DEF6Q9H4E7 631 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 APOBEC3GQ9HC16 384 aaKnown RBP16.79■□□□□ 0.28
CTSA-202ENST00000354880 TRMT1Q9NXH9 659 aaKnown RBP16.79■□□□□ 0.28
CTSA-202ENST00000354880 ADGRG1Q9Y653 693 aa16.79■□□□□ 0.28
CTSA-202ENST00000354880 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 EVI5O60447 810 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 CLSTN1O94985 981 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 ITGB3P05106 788 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 KRT19P08727 400 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 CCDC172P0C7W6 258 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 COL6A1P12109 1028 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 DIS3LQ8TF46 1054 aaKnown RBP16.78■□□□□ 0.28
CTSA-202ENST00000354880 SHC3Q92529 594 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 ZMAT2Q96NC0 199 aaKnown RBP16.78■□□□□ 0.28
CTSA-202ENST00000354880 TRAIPQ9BWF2 469 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 CXCL16Q9H2A7 254 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 HAUS4Q9H6D7 363 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 SIX4Q9UIU6 781 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 PPP2R2CQ9Y2T4 447 aa16.78■□□□□ 0.28
CTSA-202ENST00000354880 USP27XA6NNY8 438 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 CCP110O43303 1012 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 ZSCAN12O43309 604 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 MGEA5O60502 916 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 CCDC175P0C221 793 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 TBXAS1P24557 533 aaPredicted RBP16.77■□□□□ 0.28
CTSA-202ENST00000354880 RAB27AP51159 221 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 DSC3Q14574 896 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 ZNF699Q32M78 642 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 XKR4Q5GH76 650 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 C1orf53Q5VUE5 145 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 TSPAN18Q96SJ8 248 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 IFIH1Q9BYX4 1025 aaKnown RBP16.77■□□□□ 0.28
CTSA-202ENST00000354880 XYLT2Q9H1B5 865 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 SPTLC3Q9NUV7 552 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 DPP3Q9NY33 737 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 KLK14Q9P0G3 267 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 ITGA11Q9UKX5 1188 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 NUB1Q9Y5A7 615 aa16.77■□□□□ 0.28
CTSA-202ENST00000354880 DCDC2CA8MYV0 355 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 EIF3CLB5ME19 914 aaKnown RBP16.77■□□□□ 0.27
CTSA-202ENST00000354880 AKR1B10O60218 316 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 KIF11P52732 1056 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 CUL2Q13617 745 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 ZBTB6Q15916 424 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 GLRA4Q5JXX5 417 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 FAM71AQ8IYT1 594 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 ACRBPQ8NEB7 543 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 CXorf38Q8TB03 319 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 TAF4BQ92750 862 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 TOX2Q96NM4 488 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 EIF3CQ99613 913 aaKnown RBP16.77■□□□□ 0.27
CTSA-202ENST00000354880 ADAM2Q99965 735 aa16.77■□□□□ 0.27
CTSA-202ENST00000354880 R3HCC1Q9Y3T6 440 aaKnown RBP16.77■□□□□ 0.27
CTSA-202ENST00000354880 PDCD11Q14690 1871 aaKnown RBP16.77■□□□□ 0.27
CTSA-202ENST00000354880 A0A0U1RQF3 1178 aa16.76■□□□□ 0.27
CTSA-202ENST00000354880 SMIM28A0A1B0GU29 152 aa16.76■□□□□ 0.27
CTSA-202ENST00000354880 ZNF623O75123 536 aa16.76■□□□□ 0.27
CTSA-202ENST00000354880 IPO7O95373 1038 aaKnown RBP16.76■□□□□ 0.27
CTSA-202ENST00000354880 ITGA4P13612 1032 aa16.76■□□□□ 0.27
CTSA-202ENST00000354880 KCNE1P15382 129 aa16.76■□□□□ 0.27
CTSA-202ENST00000354880 USP8P40818 1118 aa16.76■□□□□ 0.27
CTSA-202ENST00000354880 PTK2Q05397 1052 aa16.76■□□□□ 0.27
CTSA-202ENST00000354880 ASTE1Q2TB18 679 aaPredicted RBP16.76■□□□□ 0.27
CTSA-202ENST00000354880 BEST2Q8NFU1 509 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms