RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PXNP49023 591 aaPredicted RBP17.51■□□□□ 0.39
DDX55-202ENST00000354291 NOVA1P51513 510 aaKnown RBP17.51■□□□□ 0.39
DDX55-202ENST00000354291 CYP4A11Q02928 519 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 EPHA7Q15375 998 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 NTRK3Q16288 839 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 TMEM132AQ24JP5 1023 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 NCAPH2Q6IBW4 605 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 ANKS3Q6ZW76 656 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 CACNA2D4Q7Z3S7 1137 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 KBTBD6Q86V97 674 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 MFSD6LQ8IWD5 586 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 TPH2Q8IWU9 490 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 HS6ST3Q8IZP7 471 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 NBEAQ8NFP9 2946 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 ZNF461Q8TAF7 563 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 TTC8Q8TAM2 541 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 LOXL4Q96JB6 756 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 ZSWIM4Q9H7M6 989 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 CYP4F11Q9HBI6 524 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 SH3GLB2Q9NR46 395 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 CYP46A1Q9Y6A2 500 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 ZMYM2Q9UBW7 1377 aa17.51■□□□□ 0.39
DDX55-202ENST00000354291 DMXL2Q8TDJ6 3036 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 SOBPA7XYQ1 873 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 HEPACAM2A8MVW5 462 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 MICAL2O94851 1124 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 EPN2O95208 641 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 MYL4P12829 197 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 GLRA2P23416 452 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 ARL2P36404 184 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 INF2Q27J81 1249 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 DGKKQ5KSL6 1271 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 MOXD1Q6UVY6 613 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 LRSAM1Q6UWE0 723 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 GPIHBP1Q8IV16 184 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 BLIDQ8IZY5 108 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 ZSCAN18Q8TBC5 510 aaPredicted RBP17.5■□□□□ 0.39
DDX55-202ENST00000354291 FAM200AQ8TCP9 573 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 FAM20AQ96MK3 541 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
DDX55-202ENST00000354291 RPP40O75818 363 aaKnown RBP17.49■□□□□ 0.39
DDX55-202ENST00000354291 RECQL4O94761 1208 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 CCDC192P0DO97 292 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 CCT2P78371 535 aaKnown RBP17.49■□□□□ 0.39
DDX55-202ENST00000354291 ROR1Q01973 937 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 NAB2Q15742 525 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 WDR44Q5JSH3 913 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 IQCEQ6IPM2 695 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 NOSTRINQ8IVI9 506 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 ELMOD1Q8N336 334 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 GAB3Q8WWW8 586 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 DDX27Q96GQ7 796 aaKnown RBP17.49■□□□□ 0.39
DDX55-202ENST00000354291 ZNF512Q96ME7 567 aaPredicted RBP17.49■□□□□ 0.39
DDX55-202ENST00000354291 SLITRK6Q9H5Y7 841 aa17.49■□□□□ 0.39
DDX55-202ENST00000354291 C8orf33Q9H7E9 229 aaPredicted RBP17.49■□□□□ 0.39
DDX55-202ENST00000354291 LRRIQ4A6NIV6 560 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 SRRM3A6NNA2 597 aaPredicted RBP17.48■□□□□ 0.39
DDX55-202ENST00000354291 TBX3O15119 743 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 TRAPPC3O43617 180 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 ABLIM3O94929 683 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 SEC24AO95486 1093 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 TOP3BO95985 862 aaKnown RBP17.48■□□□□ 0.39
DDX55-202ENST00000354291 HOXA6P31267 233 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 BRCC3P46736 316 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 RAP1GAPP47736 663 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 CLCNKBP51801 687 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 MLLT6P55198 1093 aaPredicted RBP17.48■□□□□ 0.39
DDX55-202ENST00000354291 RING1Q06587 406 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 TOB2Q14106 344 aaPredicted RBP17.48■□□□□ 0.39
DDX55-202ENST00000354291 TCEAL6Q6IPX3 200 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 C1orf228Q6PIY5 440 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 TXNDC11Q6PKC3 985 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 TRIM22Q8IYM9 498 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 TCEAL3Q969E4 200 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 ZNF274Q96GC6 653 aaPredicted RBP17.48■□□□□ 0.39
DDX55-202ENST00000354291 MSANTD3Q96H12 275 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 NFKBIZQ9BYH8 718 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
DDX55-202ENST00000354291 LHX6Q9UPM6 363 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 GDAQ9Y2T3 454 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 AKAP13Q12802 2813 aa17.48■□□□□ 0.39
DDX55-202ENST00000354291 VWA8A3KMH1 1905 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 TICRRQ7Z2Z1 1910 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 TTLL13PA6NNM8 815 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 C4orf47A7E2U8 309 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 SPECC1L-ADORA2AF8WAN1 911 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 ARNTLO00327 626 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 CPLX1O14810 134 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 EXTL3O43909 919 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 MOSPD3O75425 235 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 ATF2P15336 505 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 MPLP40238 635 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 SSRP1Q08945 709 aaKnown RBP17.47■□□□□ 0.39
DDX55-202ENST00000354291 ZNF252P-AS1Q0IIN9 211 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 PON2Q15165 354 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 TEAD2Q15562 447 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 GLRA4Q5JXX5 417 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 PLA2G2CQ5R387 149 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 CD300LGQ6UXG3 332 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 MAEAQ7L5Y9 396 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms