RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 BTBD1Q9H0C5 482 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MRPL46Q9H2W6 279 aaKnown RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 KCNK12Q9HB15 430 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 PNPOQ9NVS9 261 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 LPAR3Q9UBY5 353 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ZNF69Q9UC07 566 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 FEM1BQ9UK73 627 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 AGAP1Q9UPQ3 857 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SMG1Q96Q15 3661 aaKnown RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SIGLEC1Q9BZZ2 1709 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SHANK2Q9UPX8 1470 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 A0A1W2PQJ5 194 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 HMX3A6NHT5 357 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 A6NLC8 198 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 AHCYL1O43865 530 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CD1AP06126 327 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 PRDX5P30044 214 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SERPINF1P36955 418 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CCR5P51681 352 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CYP4F8P98187 520 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SLC13A2Q13183 592 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 TDGQ13569 410 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 KCNAB1Q14722 419 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 UBE3CQ15386 1083 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MST1LQ2TV78 715 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RAP1GAP2Q684P5 730 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ZDHHC24Q6UX98 284 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 THAP5Q7Z6K1 395 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MPP5Q8N3R9 675 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CCDC89Q8N998 374 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SCAMP5Q8TAC9 235 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SSH1Q8WYL5 1049 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SEC62Q99442 399 aaKnown RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 STK31Q9BXU1 1019 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MKNK2Q9HBH9 465 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 KMT5AQ9NQR1 393 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ING3Q9NXR8 418 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 PDP2Q9P2J9 529 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 TNFRSF10DQ9UBN6 386 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SLC23A1Q9UHI7 598 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 GPR160Q9UJ42 338 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 TMEM59LQ9UK28 342 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CEP83Q9Y592 693 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ZMYM3Q14202 1370 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MADDQ8WXG6 1647 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ZNF839A8K0R7 811 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SKAP2O75563 359 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 TIPRLO75663 272 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 GJB3O75712 270 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 INMTO95050 263 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MAN1A1P33908 653 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CCT5P48643 541 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 HERVK_113P62684 666 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ATP8B2P98198 1209 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CDC42EP1Q00587 391 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ZP2Q05996 745 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SLC14A2Q15849 920 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MAN2A1Q16706 1144 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RPTNQ6XPR3 784 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 TMPRSS7Q7RTY8 843 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 LRRTM4Q86VH4 590 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 GPATCH11Q8N954 259 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ANKRD52Q8NB46 1076 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 NAXEQ8NCW5 288 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 C3orf20Q8ND61 904 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 GIMAP7Q8NHV1 300 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 UCMAQ8WVF2 138 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RPGRQ92834 1020 aaKnown RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 FATE1Q969F0 183 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 BRIP1Q9BX63 1249 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 STK33Q9BYT3 514 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 TRIM54Q9BYV2 358 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SMYD2Q9NRG4 433 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 KIF17Q9P2E2 1029 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MYO1AQ9UBC5 1043 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 AFF4Q9UHB7 1163 aaKnown RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RABGAP1Q9Y3P9 1069 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 A0A0A6YYJ9 748 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 BTN3A1O00481 513 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 FIBPO43427 364 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 MT-ND5P03915 603 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 MAPK4P31152 587 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SREBF1P36956 1147 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SLC6A11P48066 632 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 ARFIP2P53365 341 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 FOXO4P98177 505 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 BTKQ06187 659 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SLC9A5Q14940 896 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 RAB30Q15771 203 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 L1TD1Q5T7N2 865 aaKnown RBP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 PGBD2Q6P3X8 592 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 PDXDC1Q6P996 788 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 TTC7BQ86TV6 843 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SAPCD2Q86UD0 394 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 FAM90A1Q86YD7 464 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 PQLC1Q8N2U9 271 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 TTC30BQ8N4P2 665 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SLC17A8Q8NDX2 589 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 HTRA1Q92743 480 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms