RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 RAB3IPQ96QF0 476 aaPredicted RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 DONSONQ9NYP3 566 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 SRRDQ9UH36 339 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 PCDHA13Q9Y5I0 950 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ERICH2A1L162 156 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 AP5Z1O43299 807 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 KRT86O43790 486 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ZNF202O95125 648 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 LPLP06858 475 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 PRKAR1AP10644 381 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CHMP24386 653 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ANXA13P27216 316 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CAPZA1P52907 286 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 TRIM28Q13263 835 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 CASP8Q14790 479 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CCDC96Q2M329 555 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 DDI2Q5TDH0 399 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 SYDE2Q5VT97 1194 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 E4F1Q66K89 784 aaPredicted RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 BRICD5Q6PL45 260 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CYP26C1Q6V0L0 522 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 USP37Q86T82 979 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 PPP1R14BQ96C90 147 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 SAAL1Q96ER3 474 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 TCEANC2Q96MN5 208 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 TSGA10Q9BZW7 698 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 BOLA2Q9H3K6 86 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 BICC1Q9H694 974 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 VPS37BQ9H9H4 285 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 SEC31BQ9NQW1 1179 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ARL8BQ9NVJ2 186 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.34□□□□□ -1.39
RFC1-201ENST00000349703 PNMA6EA0A0J9YXQ4 647 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 MYO1GB0I1T2 1018 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 PEX1O43933 1283 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 RPS6KA5O75582 802 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 PABPC1P11940 636 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 CD40P25942 277 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 GUCY1B3Q02153 619 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 TKFCQ3LXA3 575 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ARL13BQ3SXY8 428 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CEP85LQ5SZL2 805 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 FAM43BQ6ZT52 329 aaPredicted RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 CEP57Q86XR8 500 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CFAP206Q8IYR0 622 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ATP6V1C2Q8NEY4 427 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 REXO5Q96IC2 774 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 EPN3Q9H201 632 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 FAM53CQ9NYF3 392 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 EHD2Q9NZN4 543 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CORINQ9Y5Q5 1042 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 NPATQ14207 1427 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ARHGEF40Q8TER5 1519 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CHUKO15111 745 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 PFKFB2O60825 505 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CDH2P19022 906 aaPredicted RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 ECHS1P30084 290 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ZKSCAN8Q15776 578 aaPredicted RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 KCTD21Q4G0X4 260 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 MCMDC2Q4G0Z9 681 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 PRAMEF18Q5VWM3 479 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 FBXL19Q6PCT2 694 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 APOA5Q6Q788 366 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 TAOK1Q7L7X3 1001 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 NME9Q86XW9 330 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 NAXEQ8NCW5 288 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 RIOK1Q9BRS2 568 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 SLC28A3Q9HAS3 691 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ALG13Q9NP73 1137 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 TMCC3Q9ULS5 477 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ATP23Q9Y6H3 246 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ATP7BP35670 1465 aa6.34□□□□□ -1.4
RFC1-201ENST00000349703 CHURC1-FNTBB4DL54 471 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 NCF2P19878 526 aaPredicted RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 DRD1P21728 446 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 EEF1DP29692 281 aaKnown RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 CEBPAP49715 358 aaPredicted RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 GRIN1Q05586 938 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 SEMA3AQ14563 771 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 TAF11Q15544 211 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 FAM196AQ6ZSG2 479 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 GALNTL5Q7Z4T8 443 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 XAGE5Q8WWM1 108 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 MAP4K1Q92918 833 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 ZUFSPQ96AP4 578 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 PLPPR2Q96GM1 343 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 HIST1H2AHQ96KK5 128 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 HIST1H2AJQ99878 128 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 ECT2Q9H8V3 914 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 NEBLO76041 1014 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 NME2P22392 152 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 CMA1P23946 247 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 PMLP29590 882 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 POLD2P49005 469 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 APLP1P51693 650 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 HHEXQ03014 270 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 GRB10Q13322 594 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 MTX1Q13505 466 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 PPP1R7Q15435 360 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 AP1ARQ63HQ0 302 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms