RNA–Protein interactions for RNA: ENST00000348386.7

CAST-205, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-205ENST00000348386 LMBRD2Q68DH5 695 aaPredicted RBP8.37□□□□□ -1.07
CAST-205ENST00000348386 FAM114A1Q8IWE2 563 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 ANKRD20A12PQ8NF67 263 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 DPF3Q92784 378 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 TATDN2Q93075 761 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 POP1Q99575 1024 aaKnown RBP8.37□□□□□ -1.07
CAST-205ENST00000348386 TMX1Q9H3N1 280 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 NXF3Q9H4D5 531 aaKnown RBP8.37□□□□□ -1.07
CAST-205ENST00000348386 OCEL1Q9H607 264 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 CYLDQ9NQC7 956 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 SNTG2Q9NY99 539 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 ARMCX3Q9UH62 379 aaPredicted RBP8.37□□□□□ -1.07
CAST-205ENST00000348386 STYXL1Q9Y6J8 313 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 RPS6KL1Q9Y6S9 549 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 ZNF233A6NK53 670 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 SLC34A2O95436 690 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 TRIM49P0CI25 452 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 TRIM49CP0CI26 452 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 STAG3L1P0CL83 205 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 MCF2P10911 925 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 KRT13P13646 458 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 CSF2RAP15509 400 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 WEE1P30291 646 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 AXLP30530 894 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 DLG4P78352 724 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 BIRC2Q13490 618 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 CRELD2Q6UXH1 353 aaPredicted RBP8.37□□□□□ -1.07
CAST-205ENST00000348386 SLC9A9Q8IVB4 645 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 C12orf56Q8IXR9 622 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 KHSRPQ92945 711 aaKnown RBP eCLIP8.37□□□□□ -1.07
CAST-205ENST00000348386 KCNN1Q92952 543 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 NAP1L5Q96NT1 182 aaPredicted RBP8.37□□□□□ -1.07
CAST-205ENST00000348386 TUBGCP2Q9BSJ2 902 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 PRKD2Q9BZL6 878 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 TRIM5Q9C035 493 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 PDE11AQ9HCR9 933 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 RBAKQ9NYW8 714 aaPredicted RBP8.37□□□□□ -1.07
CAST-205ENST00000348386 KLK14Q9P0G3 267 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 IFNKQ9P0W0 207 aa8.37□□□□□ -1.07
CAST-205ENST00000348386 ZMYND8Q9ULU4 1186 aaPredicted RBP8.37□□□□□ -1.07
CAST-205ENST00000348386 MYH11P35749 1972 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 FZD6O60353 706 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 LDHAP00338 332 aaKnown RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 TIMP1P01033 207 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 CXCL8P10145 99 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 ACRP10323 421 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 EEF1GP26641 437 aaKnown RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 WNT7BP56706 349 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 UBASH3AP57075 661 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 PCBP1Q15365 356 aaKnown RBP eCLIP8.36□□□□□ -1.07
CAST-205ENST00000348386 NFIL3Q16649 462 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 TCTN1Q2MV58 587 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 UBXN11Q5T124 520 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 ZC3H3Q8IXZ2 948 aaKnown RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 PGBD3Q8N328 593 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 USP38Q8NB14 1042 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 PLEKHO2Q8TD55 490 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 LPPQ93052 612 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 NEUROD4Q9HD90 331 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 CHST12Q9NRB3 414 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 PCDHB9Q9Y5E1 797 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 PCDHB2Q9Y5E7 798 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.36□□□□□ -1.07
CAST-205ENST00000348386 MEIS3P2A8K0S8 358 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 SLC16A3O15427 465 aaKnown RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 GALR2O43603 387 aaPredicted RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 GNA14O95837 355 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 TPM2P07951 284 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 MRE11P49959 708 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 VAMP7P51809 220 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 COPB1P53618 953 aaKnown RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 CYP24A1Q07973 514 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 MYBPC2Q14324 1141 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 UVSSAQ2YD98 709 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 DCAF4L1Q3SXM0 396 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 FOXR2Q6PJQ5 311 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 FRMD5Q7Z6J6 570 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 RTN4RL1Q86UN2 441 aaPredicted RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 SEPT8Q92599 483 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 ACAP3Q96P50 834 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 FNBP1Q96RU3 617 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 PLCD4Q9BRC7 762 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 CCDC94Q9BW85 323 aaPredicted RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 CXCL16Q9H2A7 254 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 RPF1Q9H9Y2 349 aaKnown RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 KIAA1586Q9HCI6 787 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.071e-6■■■■■ 45.4
CAST-205ENST00000348386 TOPORSQ9NS56 1045 aaPredicted RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 FAM105AQ9NUU6 356 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 CPSF3Q9UKF6 684 aaKnown RBP8.36□□□□□ -1.07
CAST-205ENST00000348386 IPPQ9Y573 584 aa8.36□□□□□ -1.07
CAST-205ENST00000348386 CCDC189A1A4V9 331 aa8.35□□□□□ -1.07
CAST-205ENST00000348386 LACTBL1A8MY62 500 aa8.35□□□□□ -1.07
CAST-205ENST00000348386 KIAA0355O15063 1070 aa8.35□□□□□ -1.07
CAST-205ENST00000348386 TEX33O43247 280 aa8.35□□□□□ -1.07
CAST-205ENST00000348386 FAM189A1O60320 539 aa8.35□□□□□ -1.07
CAST-205ENST00000348386 CLTAP09496 248 aa8.35□□□□□ -1.07
CAST-205ENST00000348386 TNNI1P19237 187 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms