RNA–Protein interactions for RNA: ENST00000348161.8

TOM1L1-201, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-201ENST00000348161 TNNC2P02585 160 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 ITGB1P05556 798 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 SOX4Q06945 474 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 MICAL1Q8TDZ2 1067 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 RABGGTAQ92696 567 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 PAAF1Q9BRP4 392 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 DPP3Q9NY33 737 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 TUBGCP4Q9UGJ1 667 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 ADAM28Q9UKQ2 775 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 LZTS1Q9Y250 596 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 RFXAPO00287 272 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 PODXLO00592 558 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 STX1AQ16623 288 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 TTI2Q6NXR4 508 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 SPPL3Q8TCT6 385 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 GDPD5Q8WTR4 605 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 POF1BQ8WVV4 589 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 CEP63Q96MT8 703 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 INTS13Q9NVM9 706 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 CACNG4Q9UBN1 327 aa16.61■□□□□ 0.25
TOM1L1-201ENST00000348161 FNDC1Q4ZHG4 1894 aaPredicted RBP16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 IGFBP4P22692 258 aa16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 LRPAP1P30533 357 aa16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 AP3M2P53677 418 aa16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 ELAVL2Q12926 359 aaKnown RBP16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 FILIP1Q7Z7B0 1213 aa16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 DDX53Q86TM3 631 aaKnown RBP16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 TMEM173Q86WV6 379 aaPredicted RBP16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 EFCAB13Q8IY85 973 aa16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 PARD3BQ8TEW8 1205 aa16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 LMAN2LQ9H0V9 348 aa16.6■□□□□ 0.25
TOM1L1-201ENST00000348161 SF3B1O75533 1304 aaKnown RBP eCLIP16.59■□□□□ 0.259e-6■■■■■ 68.9
TOM1L1-201ENST00000348161 EPOPA6NHQ4 379 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 GRM6O15303 877 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 GNA14O95837 355 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 KRT19P08727 400 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 CCDC192P0DO97 292 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 VAMP7P51809 220 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 LMBRD2Q68DH5 695 aaPredicted RBP16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 KIAA1841Q6NSI8 718 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 TMC7Q7Z402 723 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 TMC2Q8TDI7 906 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 HASPINQ8TF76 798 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 POP1Q99575 1024 aaKnown RBP16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 CGRRF1Q99675 332 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 SRRTQ9BXP5 876 aaKnown RBP16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 NAT10Q9H0A0 1025 aaKnown RBP16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 METTL14Q9HCE5 456 aaKnown RBP16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 TLR9Q9NR96 1032 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 ITGA11Q9UKX5 1188 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 TMEM189-UBE2V1I3L0A0 370 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 IKBKBO14920 756 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 KIF4AO95239 1232 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 WNT7BP56706 349 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 BFSP1Q12934 665 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 CCDC40Q4G0X9 1142 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 FUT10Q6P4F1 479 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 VPS52Q8N1B4 723 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 CDX2Q99626 313 aaPredicted RBP16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 ENTPD7Q9NQZ7 604 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 LMCD1Q9NZU5 365 aa16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 ARMCX3Q9UH62 379 aaPredicted RBP16.59■□□□□ 0.25
TOM1L1-201ENST00000348161 SZT2Q5T011 3432 aa16.58■□□□□ 0.25
TOM1L1-201ENST00000348161 CDH23Q9H251 3354 aa16.58■□□□□ 0.25
TOM1L1-201ENST00000348161 LPXNO60711 386 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 PHACTR2O75167 634 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 CSPG5O95196 566 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 ITGB3P05106 788 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 PAX3P23760 479 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 CA8P35219 290 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 GUCY2FP51841 1108 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 RBP5P82980 135 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 TYRO3Q06418 890 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 ENPEPQ07075 957 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 TCERG1LQ5VWI1 586 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 C9orf57Q5W0N0 161 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 PDE12Q6L8Q7 609 aaKnown RBP16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 CREBRFQ8IUR6 639 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 ZC3H3Q8IXZ2 948 aaKnown RBP16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 NGRNQ9NPE2 291 aaKnown RBP16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 MARCH5Q9NX47 278 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 MTMR10Q9NXD2 777 aa16.58■□□□□ 0.24
TOM1L1-201ENST00000348161 SYCE3A1L190 88 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 F8W810 466 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 STX10O60499 249 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 PNPLA4P41247 253 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 BIRC3Q13489 604 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 TRAPPC11Q7Z392 1133 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 OR5B17Q8NGF7 314 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 PPP2R3CQ969Q6 453 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 MRPL38Q96DV4 380 aaKnown RBP16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 TCF25Q9BQ70 676 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 AGAP1Q9UPQ3 857 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 SSX2IPQ9Y2D8 614 aa16.57■□□□□ 0.24
TOM1L1-201ENST00000348161 GBF1Q92538 1859 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms