RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SLC9A2Q9UBY0 812 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 HNRNPCL1O60812 293 aaKnown RBP15.6■□□□□ 0.09
NUP50-201ENST00000347635 SREBF2Q12772 1141 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 SPDYE2Q495Y8 402 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 Q4G0T1 1027 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 YTHDF3Q7Z739 585 aaKnown RBP15.6■□□□□ 0.09
NUP50-201ENST00000347635 GMCL1Q96IK5 515 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 MTRQ99707 1265 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 IDI2Q9BXS1 227 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 NUB1Q9Y5A7 615 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 CFAP69A5D8W1 941 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 ZBED1O96006 694 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 FGRP09769 529 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 ITGB3BPQ13352 177 aaPredicted RBP15.6■□□□□ 0.09
NUP50-201ENST00000347635 TAF1CQ15572 869 aaPredicted RBP15.6■□□□□ 0.09
NUP50-201ENST00000347635 KCNK18Q7Z418 384 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 RCOR2Q8IZ40 523 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 ERP27Q96DN0 273 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 MED10Q9BTT4 135 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 RPF1Q9H9Y2 349 aaKnown RBP15.6■□□□□ 0.09
NUP50-201ENST00000347635 LRFN2Q9ULH4 789 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 CASQ2O14958 399 aaPredicted RBP15.6■□□□□ 0.09
NUP50-201ENST00000347635 TRAPPC3O43617 180 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 MYL3P08590 195 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 FECHP22830 423 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 HIF1AQ16665 826 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 LONP2Q86WA8 852 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 ERO1BQ86YB8 467 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 NACA2Q9H009 215 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 VCX3AQ9NNX9 186 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 SYNPO2Q9UMS6 1093 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 NEU2Q9Y3R4 380 aa15.6■□□□□ 0.09
NUP50-201ENST00000347635 EIF4E1BA6NMX2 242 aaKnown RBP15.59■□□□□ 0.09
NUP50-201ENST00000347635 NQO1P15559 274 aaKnown RBP15.59■□□□□ 0.09
NUP50-201ENST00000347635 GTF2A2P52657 109 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 KCNMA1Q12791 1236 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 MAPK6Q16659 721 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 OR6B2Q6IFH4 312 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 GPC2Q8N158 579 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 NME8Q8N427 588 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 RIBC1Q8N443 379 aaPredicted RBP15.59■□□□□ 0.09
NUP50-201ENST00000347635 FOXP3Q9BZS1 431 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 PRKAG2Q9UGJ0 569 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 GTF3C4Q9UKN8 822 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 ASAP2O43150 1006 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 ZNF157P51786 506 aaPredicted RBP15.59■□□□□ 0.09
NUP50-201ENST00000347635 PSMD6Q15008 389 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 KYAT1Q16773 422 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 NT5DC3Q86UY8 548 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 LRRC4BQ9NT99 713 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 KLHL11Q9NVR0 708 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 GABBR1Q9UBS5 961 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 SSTR3P32745 418 aaPredicted RBP15.59■□□□□ 0.09
NUP50-201ENST00000347635 SLC12A2P55011 1212 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 SNRPFP62306 86 aaKnown RBP15.59■□□□□ 0.09
NUP50-201ENST00000347635 SH2D4BQ5SQS7 431 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 ANKMY2Q8IV38 441 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 SCYL1Q96KG9 808 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 KLC2Q9H0B6 622 aa15.59■□□□□ 0.09
NUP50-201ENST00000347635 POLR3FQ9H1D9 316 aaPredicted RBP15.59■□□□□ 0.09
NUP50-201ENST00000347635 TNPO2O14787 897 aaKnown RBP15.58■□□□□ 0.09
NUP50-201ENST00000347635 EPHX2P34913 555 aa15.58■□□□□ 0.09
NUP50-201ENST00000347635 MAGEA4P43358 317 aa15.58■□□□□ 0.09
NUP50-201ENST00000347635 TPD52P55327 224 aaPredicted RBP15.58■□□□□ 0.09
NUP50-201ENST00000347635 GLIS3Q8NEA6 775 aa15.58■□□□□ 0.09
NUP50-201ENST00000347635 CYTH2Q99418 400 aa15.58■□□□□ 0.09
NUP50-201ENST00000347635 TMEM8AQ9HCN3 771 aa15.58■□□□□ 0.09
NUP50-201ENST00000347635 JPH1Q9HDC5 661 aaPredicted RBP15.58■□□□□ 0.09
NUP50-201ENST00000347635 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.58■□□□□ 0.09
NUP50-201ENST00000347635 SRRM3A6NNA2 597 aaPredicted RBP15.58■□□□□ 0.08
NUP50-201ENST00000347635 KRT7P08729 469 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 OSTNP61366 133 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 DACT2Q5SW24 774 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 PDZD4Q76G19 769 aaPredicted RBP15.58■□□□□ 0.08
NUP50-201ENST00000347635 C4orf33Q8N1A6 199 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 RIT2Q99578 217 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 PSMC3IPQ9P2W1 217 aaPredicted RBP15.58■□□□□ 0.08
NUP50-201ENST00000347635 KIAA0391O15091 583 aaKnown RBP15.58■□□□□ 0.08
NUP50-201ENST00000347635 CRCPO75575 148 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 SGPL1O95470 568 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 SREBF1P36956 1147 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 GPRC5AQ8NFJ5 357 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 RDM1Q8NG50 284 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 NSMCE1Q8WV22 266 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 BTBD6Q96KE9 485 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 SPATA33Q96N06 139 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 MED15Q96RN5 788 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 SENP7Q9BQF6 1050 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 WHRNQ9P202 907 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 KRT38O76015 456 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 PSMC6P62333 389 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 BAATQ14032 418 aaPredicted RBP15.58■□□□□ 0.08
NUP50-201ENST00000347635 SPDYCQ5MJ68 293 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 C11orf63Q6NUN7 778 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 ARMC2Q8NEN0 867 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 PPCSQ9HAB8 311 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 TMX2Q9Y320 296 aa15.58■□□□□ 0.08
NUP50-201ENST00000347635 BTNL10A8MVZ5 291 aa15.57■□□□□ 0.08
NUP50-201ENST00000347635 PI4K2BG5E9Z4 385 aa15.57■□□□□ 0.08
NUP50-201ENST00000347635 KIF3CO14782 793 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms