RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FKBP1CQ5VVH2 108 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 MON1BQ7L1V2 547 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 EEPD1Q7L9B9 569 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 RHOT2Q8IXI1 618 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 CCDC13Q8IYE1 715 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 CCDC105Q8IYK2 499 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 AGBL3Q8NEM8 1001 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 SYNGAP1Q96PV0 1343 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 RPS6KC1Q96S38 1066 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 PAGR1Q9BTK6 254 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 POLR3FQ9H1D9 316 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-201ENST00000347613 FAM114A2Q9NRY5 505 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 TBC1D22BQ9NU19 505 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 FBXO40Q9UH90 709 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 CYTH4Q9UIA0 394 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 GRID1Q9ULK0 1009 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 ADAMTS5Q9UNA0 930 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 C5orf60A6NFR6 353 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 FSCN2O14926 492 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 SPOPO43791 374 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 HLA-DRAP01903 254 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 CYP1A1P04798 512 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 PAEPP09466 180 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 IQCF3P0C7M6 154 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 FGFR1P11362 822 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 BACE1P56817 501 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 TTC31Q49AM3 519 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 AGBL2Q5U5Z8 902 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 TRIM50Q86XT4 487 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 NIM1KQ8IY84 436 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 RTKN2Q8IZC4 609 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 SAMD3Q8N6K7 520 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 ARFGAP1Q8N6T3 406 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 MGARPQ8TDB4 240 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 LRRC45Q96CN5 670 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 C11orf70Q9BRQ4 267 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 KIF9Q9HAQ2 790 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 NUMBLQ9Y6R0 609 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 EVPLQ92817 2033 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 ADGRA2Q96PE1 1338 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 PTPRFP10586 1907 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 F8VP50 259 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 ARIH2O95376 493 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 HARSP12081 509 aaKnown RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 GJC1P36383 396 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 ITGA8P53708 1063 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 ZNF280AP59817 542 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 CLDN10P78369 228 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 MGAT5Q09328 741 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 MAMLD1Q13495 774 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 RNF187Q5TA31 235 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 CEP120Q8N960 986 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 SUPT20HQ8NEM7 779 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 LRRN4Q8WUT4 740 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 CCT6BQ92526 530 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 XPO6Q96QU8 1125 aaKnown RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 C12orf65Q9H3J6 166 aaKnown RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 LRRC19Q9H756 370 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 TBK1Q9UHD2 729 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 GJA3Q9Y6H8 435 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 PMM2O15305 246 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 CTNND1O60716 968 aaKnown RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 DRG2P55039 364 aaKnown RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 MFAP3P55082 362 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 DMP1Q13316 513 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 ZACNQ401N2 412 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 CIAPIN1Q6FI81 312 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 MMS22LQ6ZRQ5 1243 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 GPD1LQ8N335 351 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 NEK9Q8TD19 979 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 TRAPPC12Q8WVT3 735 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 TFAP2BQ92481 460 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 SPOCK2Q92563 424 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 WRNIP1Q96S55 665 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 WDR83Q9BRX9 315 aaKnown RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 HAUS2Q9NVX0 235 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 BTBD7Q9P203 1132 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 CNOT7Q9UIV1 285 aaKnown RBP6.45□□□□□ -1.38
CLCN3-201ENST00000347613 LOC285556D6RIA3 1793 aa6.45□□□□□ -1.38
CLCN3-201ENST00000347613 GSTTP1A0A1W2PQM5 241 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 ZBTB42B2RXF5 422 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 P4HA2O15460 535 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 RASSF9O75901 435 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 CHRNA3P32297 505 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 ACTN3Q08043 901 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-201ENST00000347613 DHX34Q14147 1143 aaKnown RBP6.44□□□□□ -1.38
CLCN3-201ENST00000347613 TAF5Q15542 800 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 CNGA2Q16280 664 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 LY6KQ17RY6 165 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 WDR72Q3MJ13 1102 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 ANKRD20A8PQ5CZ79 823 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 ANGEL2Q5VTE6 544 aaKnown RBP6.44□□□□□ -1.38
CLCN3-201ENST00000347613 TMEM270Q6UE05 265 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 PLCD3Q8N3E9 789 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 PPP1R13LQ8WUF5 828 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 PPM1EQ8WY54 764 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 HAUS1Q96CS2 278 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 C9orf72Q96LT7 481 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 SELENOSQ9BQE4 189 aa6.44□□□□□ -1.38
CLCN3-201ENST00000347613 FAM129AQ9BZQ8 928 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms