RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 DDX23Q9BUQ8 820 aaKnown RBP25.8■■□□□ 1.72
PTPA-202ENST00000347048 PDLIM7Q9NR12 457 aa25.8■■□□□ 1.72
PTPA-202ENST00000347048 HAUS2Q9NVX0 235 aa25.8■■□□□ 1.72
PTPA-202ENST00000347048 GABBR1Q9UBS5 961 aa25.8■■□□□ 1.72
PTPA-202ENST00000347048 STBD1O95210 358 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 RRM1P23921 792 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 ITGA8P53708 1063 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 PSMD6Q15008 389 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 LONRF1Q17RB8 773 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 LIN9Q5TKA1 542 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 TRMT1LQ7Z2T5 733 aaKnown RBP25.79■■□□□ 1.72
PTPA-202ENST00000347048 BICD1Q96G01 975 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 FAM213AQ9BRX8 229 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 ARHGAP28Q9P2N2 729 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 SLC12A4Q9UP95 1085 aa25.79■■□□□ 1.72
PTPA-202ENST00000347048 ACSL3O95573 720 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 NBPF9Q3BBW0 867 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 VSIG10LQ86VR7 867 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 RELL1Q8IUW5 271 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 TTLL6Q8N841 843 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 KCNN1Q92952 543 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 VCPIP1Q96JH7 1222 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 ELAC2Q9BQ52 826 aaKnown RBP25.78■■□□□ 1.72
PTPA-202ENST00000347048 ANAPC5Q9UJX4 755 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 ADGRA3Q8IWK6 1321 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 PSAPP07602 524 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 POTEJP0CG39 1038 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 RDXP35241 583 aaKnown RBP25.78■■□□□ 1.72
PTPA-202ENST00000347048 CHKAP35790 457 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 CCNG2Q16589 344 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 ZACNQ401N2 412 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 MON1BQ7L1V2 547 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 RHOT1Q8IXI2 618 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.78■■□□□ 1.72
PTPA-202ENST00000347048 DYDC1Q8WWB3 177 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 SCLT1Q96NL6 688 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 PI4K2AQ9BTU6 479 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 FOXP3Q9BZS1 431 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 ATP6V0A4Q9HBG4 840 aa25.78■■□□□ 1.72
PTPA-202ENST00000347048 MRPL47Q9HD33 250 aaKnown RBP25.78■■□□□ 1.72
PTPA-202ENST00000347048 COL4A5P29400 1685 aa25.77■■□□□ 1.72
PTPA-202ENST00000347048 KLF1Q13351 362 aaPredicted RBP25.77■■□□□ 1.72
PTPA-202ENST00000347048 TRPM8Q7Z2W7 1104 aa25.77■■□□□ 1.72
PTPA-202ENST00000347048 CCDC89Q8N998 374 aa25.77■■□□□ 1.72
PTPA-202ENST00000347048 TACO1Q9BSH4 297 aaKnown RBP25.77■■□□□ 1.72
PTPA-202ENST00000347048 LGALS13Q9UHV8 139 aa25.77■■□□□ 1.72
PTPA-202ENST00000347048 ZNRF3Q9ULT6 936 aa25.77■■□□□ 1.72
PTPA-202ENST00000347048 WDR81Q562E7 1941 aa25.77■■□□□ 1.72
PTPA-202ENST00000347048 NFASCO94856 1347 aa25.77■■□□□ 1.72
PTPA-202ENST00000347048 ZNF862O60290 1169 aa25.76■■□□□ 1.72
PTPA-202ENST00000347048 SNX3O60493 162 aa25.76■■□□□ 1.72
PTPA-202ENST00000347048 OAS1P00973 400 aaKnown RBP25.76■■□□□ 1.72
PTPA-202ENST00000347048 KATNAL2Q8IYT4 538 aa25.76■■□□□ 1.72
PTPA-202ENST00000347048 CPA5Q8WXQ8 436 aa25.76■■□□□ 1.72
PTPA-202ENST00000347048 ATG4AQ8WYN0 398 aa25.76■■□□□ 1.72
PTPA-202ENST00000347048 FNBP1Q96RU3 617 aa25.76■■□□□ 1.72
PTPA-202ENST00000347048 MTFR1LQ9H019 292 aa25.76■■□□□ 1.72
PTPA-202ENST00000347048 NEU2Q9Y3R4 380 aa25.76■■□□□ 1.72
PTPA-202ENST00000347048 TMEM120BA0PK00 339 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 WNT10BO00744 389 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 THAP12O43422 761 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 ADCY8P40145 1251 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 IFNAR2P48551 515 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 CCDC38Q502W7 563 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 ZNF516Q92618 1163 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 PLCD4Q9BRC7 762 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 ZNF277Q9NRM2 450 aaPredicted RBP25.76■■□□□ 1.71
PTPA-202ENST00000347048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.76■■□□□ 1.712e-15■■□□□ 13.6
PTPA-202ENST00000347048 STYXL1Q9Y6J8 313 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 SCINQ9Y6U3 715 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 UMODL1Q5DID0 1318 aa25.76■■□□□ 1.71
PTPA-202ENST00000347048 CFAP73A6NFT4 308 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 ATP2C2O75185 946 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 HLA-DRAP01903 254 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 NR3C2P08235 984 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 LIG4P49917 911 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 VSTM1Q6UX27 236 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 ZKSCAN4Q969J2 545 aaPredicted RBP25.75■■□□□ 1.71
PTPA-202ENST00000347048 CDHR1Q96JP9 859 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 XPNPEP1Q9NQW7 623 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 MGRN1O60291 552 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 C4BPAP04003 597 aaKnown RBP25.75■■□□□ 1.71
PTPA-202ENST00000347048 KCNA2P16389 499 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 MKRN3Q13064 507 aaKnown RBP25.75■■□□□ 1.71
PTPA-202ENST00000347048 ZNF365Q70YC5 407 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 TAS1R3Q7RTX0 852 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 NIM1KQ8IY84 436 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 CCDC77Q9BR77 488 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 TRIM7Q9C029 511 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 RPAP3Q9H6T3 665 aaPredicted RBP25.75■■□□□ 1.71
PTPA-202ENST00000347048 CYP26B1Q9NR63 512 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 RNF146Q9NTX7 359 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 NINJ2Q9NZG7 142 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 USP15Q9Y4E8 981 aaPredicted RBP25.75■■□□□ 1.71
PTPA-202ENST00000347048 ACTL7BQ9Y614 415 aa25.75■■□□□ 1.71
PTPA-202ENST00000347048 VWA5AO00534 786 aa25.74■■□□□ 1.71
PTPA-202ENST00000347048 PIK3CAP42336 1068 aa25.74■■□□□ 1.71
PTPA-202ENST00000347048 SOX10P56693 466 aa25.74■■□□□ 1.71
PTPA-202ENST00000347048 LMNB2Q03252 620 aa25.74■■□□□ 1.71
PTPA-202ENST00000347048 BAATQ14032 418 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms