RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 ZNF564Q8TBZ8 553 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PPP1R16BQ96T49 567 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CARD9Q9H257 536 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ABHD16BQ9H3Z7 469 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PLEKHA4Q9H4M7 779 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PRDM10Q9NQV6 1147 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZHX1Q9UKY1 873 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 AKT3Q9Y243 479 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 A0A087WZ62 844 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TMEM110-MUSTN1A8MSY1 372 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 KRIT1O00522 736 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 HEXIM1O94992 359 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ASS1P00966 412 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PHKA2P46019 1235 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 POU5F1BQ06416 359 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 SURF1Q15526 300 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 NPLOC4Q8TAT6 608 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 AENQ8WTP8 325 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ALG3Q92685 438 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 FDXACB1Q9BRP7 624 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PRMT7Q9NVM4 692 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 UVRAGQ9P2Y5 699 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TTC7AQ9ULT0 858 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CNTN6Q9UQ52 1028 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TNFSF13BQ9Y275 285 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 A0A0U1RQG5 324 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZSCAN5CA6NGD5 496 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 RAD51CO43502 376 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ECM2O94769 699 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 FGGP02679 453 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 VTNP04004 478 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 HOXC6P09630 235 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 COMTP21964 271 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TMOD1P28289 359 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MYL6P60660 151 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TFAMQ00059 246 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GUCY2DQ02846 1103 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 DMTNQ08495 405 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 IFT20Q8IY31 132 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CPA5Q8WXQ8 436 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZBTB9Q96C00 473 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 RPS6KC1Q96S38 1066 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CDT1Q9H211 546 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CNOT8Q9UFF9 292 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CPA4Q9UI42 421 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 COL1A2P08123 1366 aa15.11■□□□□ 0.01
CDK5RAP1-202ENST00000346416 SLC15A5A6NIM6 579 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MIF4GDA9UHW6 222 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MMP3P08254 477 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ITGA4P13612 1032 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TNFRSF8P28908 595 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 OAS2P29728 719 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GNA15P30679 374 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 HUNKP57058 714 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MTHFD1LQ6UB35 978 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 EFCAB13Q8IY85 973 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 RBBP8NLQ8NC74 664 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 OR6J1Q8NGC5 347 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CYFIP2Q96F07 1278 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 BTBD6Q96KE9 485 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 RNPC3Q96LT9 517 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 VIPAS39Q9H9C1 493 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 EPB41L5Q9HCM4 733 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GDF3Q9NR23 364 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 DOCK3Q8IZD9 2030 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ESYT3A0FGR9 886 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CCDC188H7C350 402 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GPR25O00155 361 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 SART1O43290 800 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ADCY6O43306 1168 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 B4GALT4O60513 344 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CYP1A1P04798 512 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TMEM191BP0C7N4 346 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GPS2Q13227 327 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZNF211Q13398 564 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 FAM187BQ17R55 369 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 SGSM1Q2NKQ1 1148 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 NAA35Q5VZE5 725 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 IQSEC1Q6DN90 963 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TMEM192Q8IY95 271 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MCOLN2Q8IZK6 566 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 UBL4BQ8N7F7 174 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 KRT35Q92764 455 aa15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 DDX47Q9H0S4 455 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZCCHC17Q9NP64 241 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP1-202ENST00000346416 KAT6AQ92794 2004 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 H3BQF6 201 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CFHP08603 1231 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CXCL8P10145 99 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 HOXD8P13378 290 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 NSFP46459 744 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 EPHB4P54760 987 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CENPCQ03188 943 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PPFIA1Q13136 1202 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TRPC3Q13507 836 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 AMHR2Q16671 573 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 DGKDQ16760 1214 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZSWIM1Q9BR11 485 aa15.09■□□□□ 0.01
CDK5RAP1-202ENST00000346416 RPF1Q9H9Y2 349 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms