RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FRMD8P1Q9BZ68 369 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-201ENST00000345617 A0A1B0GTH6 734 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 NNMTP40261 264 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 PLOD1Q02809 727 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-201ENST00000345617 WDR24Q96S15 920 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 USP1O94782 785 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 RC3H1Q5TC82 1133 aaKnown RBP20.3■□□□□ 0.84
HDAC4-201ENST00000345617 GMEB1Q9Y692 573 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 CALB2P22676 271 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 SERPINH1P50454 418 aaKnown RBP20.3■□□□□ 0.84
HDAC4-201ENST00000345617 C6orf10Q5SRN2 563 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 C19orf18Q8NEA5 215 aa20.3■□□□□ 0.84
HDAC4-201ENST00000345617 CENPXA8MT69 81 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 PDE9AO76083 593 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 ATP1A1P05023 1023 aaKnown RBP20.29■□□□□ 0.84
HDAC4-201ENST00000345617 ANXA11P50995 505 aaKnown RBP20.29■□□□□ 0.84
HDAC4-201ENST00000345617 DRAP1Q14919 205 aaPredicted RBP20.29■□□□□ 0.84
HDAC4-201ENST00000345617 KCTD1Q719H9 257 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 LRRC49Q8IUZ0 686 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 OR6P1Q8NGX9 317 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 KLHL25Q9H0H3 589 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 UBAP1Q9NZ09 502 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 ANO4Q32M45 955 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 LRRC39Q96DD0 335 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 CLMNQ96JQ2 1002 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 TMEM120BA0PK00 339 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 FAM25AB3EWG3 89 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 FAM25CB3EWG5 89 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 FAM25GB3EWG6 89 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 OTULINQ96BN8 352 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
HDAC4-201ENST00000345617 STK33Q9BYT3 514 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 VSNL1P62760 191 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 UBE3AQ05086 875 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 PTPN12Q05209 780 aaKnown RBP20.29■□□□□ 0.84
HDAC4-201ENST00000345617 SCARA5Q6ZMJ2 495 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 CYFIP1Q7L576 1253 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 TRPC7Q9HCX4 862 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 PLEKHG2Q9H7P9 1386 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 ACTR2P61160 394 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 EIF2B5Q13144 721 aaKnown RBP20.29■□□□□ 0.84
HDAC4-201ENST00000345617 SGSM1Q2NKQ1 1148 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 DPP9Q86TI2 863 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 MAGEB18Q96M61 343 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 APOL6Q9BWW8 343 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 BHMT2Q9H2M3 363 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 PI4KBQ9UBF8 816 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 A0A1W2PQJ5 194 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 SYN2Q92777 582 aaPredicted RBP20.29■□□□□ 0.84
HDAC4-201ENST00000345617 CD209Q9NNX6 404 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 SPDYE5A6NIY4 337 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 MYO1GB0I1T2 1018 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 SPDYE7PQ495Y7 208 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 C17orf80Q9BSJ5 609 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 GRID1Q9ULK0 1009 aa20.29■□□□□ 0.84
HDAC4-201ENST00000345617 S100A9P06702 114 aaKnown RBP20.28■□□□□ 0.84
HDAC4-201ENST00000345617 CAPN1P07384 714 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 LRRC14Q15048 493 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 MAPK6Q16659 721 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 EVPLLA8MZ36 301 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 LLGL1Q15334 1064 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 PFKFB3Q16875 520 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-201ENST00000345617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.28■□□□□ 0.842e-6■□□□□ 9.1
HDAC4-201ENST00000345617 TTC26A0AVF1 554 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 A8MXQ7 604 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 KCNK10P57789 538 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 EPS8Q12929 822 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 ARMC3Q5W041 872 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 GADL1Q6ZQY3 521 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 KCTD17Q8N5Z5 321 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 MAP3K4Q9Y6R4 1608 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 NBPF26B4DH59 902 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 CD2BP2O95400 341 aaKnown RBP20.28■□□□□ 0.84
HDAC4-201ENST00000345617 GYG1P46976 350 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 PRELPP51888 382 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 TRAPPC11Q7Z392 1133 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 NBPF15Q8N660 670 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 MTERF3Q96E29 417 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 HEMGNQ9BXL5 484 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 POLBP06746 335 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 SNAP25P60880 206 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 ARHGAP17Q68EM7 881 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 TRMT2AQ8IZ69 625 aaKnown RBP20.28■□□□□ 0.84
HDAC4-201ENST00000345617 ZNF483Q8TF39 744 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-201ENST00000345617 PDCD6IPQ8WUM4 868 aaKnown RBP20.28■□□□□ 0.84
HDAC4-201ENST00000345617 RMND5BQ96G75 393 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-201ENST00000345617 TINF2Q9BSI4 451 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 BEST2Q8NFU1 509 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 CNTRLQ7Z7A1 2325 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 PRPF4O43172 522 aaKnown RBP eCLIP20.28■□□□□ 0.842e-6■■■□□ 17.3
HDAC4-201ENST00000345617 SPRP35270 261 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-201ENST00000345617 CENPCQ03188 943 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 SNUPNO95149 360 aaKnown RBP20.28■□□□□ 0.84
HDAC4-201ENST00000345617 PKN3Q6P5Z2 889 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 PGBD4Q96DM1 585 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 TRAPPC9Q96Q05 1148 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 CTNNAL1Q9UBT7 734 aa20.28■□□□□ 0.84
HDAC4-201ENST00000345617 CDH24Q86UP0 819 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 STK32BQ9NY57 414 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 NEU2Q9Y3R4 380 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms