RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CASP4P49662 377 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 AP3M2P53677 418 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 ITIH4Q14624 930 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 GPR162Q16538 588 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 SWSAP1Q6NVH7 229 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 SLC13A5Q86YT5 568 aaPredicted RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 TEX9Q8N6V9 391 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 EIF1ADQ8N9N8 165 aaKnown RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 FAM167AQ96KS9 214 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 MTRQ99707 1265 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 TRIM56Q9BRZ2 755 aaKnown RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 THTPAQ9BU02 230 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 KLC2Q9H0B6 622 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 RBAKQ9NYW8 714 aaPredicted RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 XPOTO43592 962 aaKnown RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 GMNNO75496 209 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 KRT38O76015 456 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 COILP38432 576 aaPredicted RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 KCTD2Q14681 263 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 MAPK6Q16659 721 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 CIAPIN1Q6FI81 312 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 CRLF3Q8IUI8 442 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 TTLL6Q8N841 843 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 RBM15Q96T37 977 aaKnown RBP eCLIP11.51□□□□□ -0.57
RPL28-201ENST00000344063 POLR3FQ9H1D9 316 aaPredicted RBP11.51□□□□□ -0.57
RPL28-201ENST00000344063 PPCSQ9HAB8 311 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 TMEM8AQ9HCN3 771 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 OLFML3Q9NRN5 406 aa11.51□□□□□ -0.57
RPL28-201ENST00000344063 LGR5O75473 907 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 DGAT1O75907 488 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ZWINTO95229 277 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 SRGAP2CP0DJJ0 459 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 HNRNPH3P31942 346 aaKnown RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 IGBP1P78318 339 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ASPHQ12797 758 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 THOC5Q13769 683 aaKnown RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 ZNF699Q32M78 642 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ANKRD20A2Q5SQ80 823 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ANKRD20A1Q5TYW2 823 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 HACE1Q8IYU2 909 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 CCT6BQ92526 530 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 TNFRSF25Q93038 417 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 FAF2Q96CS3 445 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 SCYL1Q96KG9 808 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 MXRA8Q9BRK3 442 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 SEPT10Q9P0V9 454 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 PCDHB2Q9Y5E7 798 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 FANCGO15287 622 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ARSEP51690 589 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ALDH18A1P54886 795 aaKnown RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 NOP14P78316 857 aaKnown RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 PHEXP78562 749 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 STXBP2Q15833 593 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 MMEL1Q495T6 779 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 GADL1Q6ZQY3 521 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 TMC3Q7Z5M5 1100 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 PPM1NQ8N819 430 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 PARD3BQ8TEW8 1205 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 BTBD6Q96KE9 485 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 SLC4A9Q96Q91 983 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 GDF3Q9NR23 364 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ASNSD1Q9NWL6 643 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 FOXN3O00409 490 aaPredicted RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 C21orf2O43822 256 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 LPXNO60711 386 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 CRCPO75575 148 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 FGRP09769 529 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 OSTNP61366 133 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 Q4G0T1 1027 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 BTNL9Q6UXG8 535 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 THNSL1Q8IYQ7 743 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ATG4AQ8WYN0 398 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 FAM149B1Q96BN6 582 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 MTMR9Q96QG7 549 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 SH2D3AQ9BRG2 576 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 MCM8Q9UJA3 840 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 PCDHGC5Q9Y5F6 944 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ZHX2Q9Y6X8 837 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 GIPC1O14908 333 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 VEGFAP15692 232 aaPredicted RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 ITGA8P53708 1063 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 ATXN3P54252 364 aaPredicted RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 PDCD2Q16342 344 aaPredicted RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 IL17AQ16552 155 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 RCOR2Q8IZ40 523 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 HEXIM2Q96MH2 286 aaKnown RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 NGRNQ9NPE2 291 aaKnown RBP11.5□□□□□ -0.57
RPL28-201ENST00000344063 CYP26B1Q9NR63 512 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 TRIM33Q9UPN9 1127 aa11.5□□□□□ -0.57
RPL28-201ENST00000344063 SMIM22K7EJ46 135 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 MYBPC2Q14324 1141 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 MIIPQ5JXC2 388 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 SNRNP48Q6IEG0 339 aaKnown RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 BZW1Q7L1Q6 419 aaKnown RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 WDR75Q8IWA0 830 aaKnown RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 RIBC1Q8N443 379 aaPredicted RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 HSPH1Q92598 858 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 TATDN2Q93075 761 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 HIC2Q96JB3 615 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms