RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CES2O00748 559 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 ATMINO43313 823 aaPredicted RBP19.95■□□□□ 0.78
HOXA9-201ENST00000343483 CEP104O60308 925 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 PPFIA4O75335 1185 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 OSTNP61366 133 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 ACVR2BQ13705 512 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 NCOA4Q13772 614 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 WDR49Q8IV35 697 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 THNSL1Q8IYQ7 743 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 NPLOC4Q8TAT6 608 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 DDX1Q92499 740 aaKnown RBP19.95■□□□□ 0.78
HOXA9-201ENST00000343483 PBKQ96KB5 322 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 ABHD16BQ9H3Z7 469 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 AKT3Q9Y243 479 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 H3BRB1 525 aa19.94■□□□□ 0.78
HOXA9-201ENST00000343483 PHKA2P46019 1235 aa19.94■□□□□ 0.78
HOXA9-201ENST00000343483 NOP14P78316 857 aaKnown RBP19.94■□□□□ 0.78
HOXA9-201ENST00000343483 CUL2Q13617 745 aa19.94■□□□□ 0.78
HOXA9-201ENST00000343483 DUSP28Q4G0W2 176 aa19.94■□□□□ 0.78
HOXA9-201ENST00000343483 SND1Q7KZF4 910 aaKnown RBP eCLIP19.94■□□□□ 0.78
HOXA9-201ENST00000343483 OR6J1Q8NGC5 347 aa19.94■□□□□ 0.78
HOXA9-201ENST00000343483 MTMR12Q9C0I1 747 aa19.94■□□□□ 0.78
HOXA9-201ENST00000343483 TUT1Q9H6E5 874 aaKnown RBP19.94■□□□□ 0.78
HOXA9-201ENST00000343483 CPSF3Q9UKF6 684 aaKnown RBP19.94■□□□□ 0.78
HOXA9-201ENST00000343483 MAGEB2O15479 319 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 CSDE1O75534 798 aaKnown RBP19.93■□□□□ 0.78
HOXA9-201ENST00000343483 IQCF3P0C7M6 154 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 PROZP22891 400 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 HES6Q96HZ4 224 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 IMPG2Q9BZV3 1241 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 IFT122Q9HBG6 1241 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 SLC15A5A6NIM6 579 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 SYF2O95926 243 aaKnown RBP19.93■□□□□ 0.78
HOXA9-201ENST00000343483 TNFRSF8P28908 595 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 EEF1DP3Q658K8 133 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 SCARA3Q6AZY7 606 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 USP38Q8NB14 1042 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 PTPRHQ9HD43 1115 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 PSD3Q9NYI0 1048 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 NUB1Q9Y5A7 615 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 PCDHB2Q9Y5E7 798 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 UMODL1Q5DID0 1318 aa19.93■□□□□ 0.78
HOXA9-201ENST00000343483 A0A087WZ62 844 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 VTNP04004 478 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 MMP3P08254 477 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 CLTAP09496 248 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 TMOD1P28289 359 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 AP3M2P53677 418 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 EPHB4P54760 987 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 NOGQ13253 232 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 IFT20Q8IY31 132 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 ZNF653Q96CK0 615 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 KRT12Q99456 494 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 FDXACB1Q9BRP7 624 aaPredicted RBP19.92■□□□□ 0.78
HOXA9-201ENST00000343483 SLC5A4Q9NY91 659 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 PCDHB4Q9Y5E5 795 aa19.92■□□□□ 0.78
HOXA9-201ENST00000343483 TMEM110-MUSTN1A8MSY1 372 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 IGF2BP3O00425 579 aaKnown RBP eCLIP19.91■□□□□ 0.78
HOXA9-201ENST00000343483 RNF40O75150 1001 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 LMAN1P49257 510 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 TFAMQ00059 246 aaKnown RBP19.91■□□□□ 0.78
HOXA9-201ENST00000343483 PPFIA1Q13136 1202 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 TMEM270Q6UE05 265 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 CEP120Q8N960 986 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 NFKBIZQ9BYH8 718 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 PRMT7Q9NVM4 692 aaPredicted RBP19.91■□□□□ 0.78
HOXA9-201ENST00000343483 PGRMC1O00264 195 aaKnown RBP19.91■□□□□ 0.78
HOXA9-201ENST00000343483 ADCY6O43306 1168 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 HEXIM1O94992 359 aaKnown RBP19.91■□□□□ 0.78
HOXA9-201ENST00000343483 CST3P01034 146 aaPredicted RBP19.91■□□□□ 0.78
HOXA9-201ENST00000343483 GLI1P08151 1106 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 ACO1P21399 889 aaKnown RBP19.91■□□□□ 0.78
HOXA9-201ENST00000343483 TBXAS1P24557 533 aaPredicted RBP19.91■□□□□ 0.78
HOXA9-201ENST00000343483 GGCXP38435 758 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 HADHBP55084 474 aaKnown RBP19.91■□□□□ 0.78
HOXA9-201ENST00000343483 BPIFB4P59827 614 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 TNNC1P63316 161 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 DGKDQ16760 1214 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 DUOXA2Q1HG44 320 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 CLEC16AQ2KHT3 1053 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 IQSEC1Q6DN90 963 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 EMBQ6PCB8 327 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 MTHFD1LQ6UB35 978 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 LINC01465Q8N7H1 131 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 ACTRT1Q8TDG2 376 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 SCLT1Q96NL6 688 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 CDT1Q9H211 546 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 TNFSF13BQ9Y275 285 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 COL1A2P08123 1366 aa19.91■□□□□ 0.78
HOXA9-201ENST00000343483 SURF1Q15526 300 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 PRAMEF19Q5SWL8 479 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 ACAD10Q6JQN1 1059 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 NUP85Q9BW27 656 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 GDF3Q9NR23 364 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 NOC2LQ9Y3T9 749 aaKnown RBP19.9■□□□□ 0.78
HOXA9-201ENST00000343483 CCDC66A2RUB6 948 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 GOLGA6BA6NDN3 693 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 TMEM191BP0C7N4 346 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 MYL6P60660 151 aa19.9■□□□□ 0.78
HOXA9-201ENST00000343483 GUCY2DQ02846 1103 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms