RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 UTYO14607 1347 aa12.77□□□□□ -0.36
SEMA6A-202ENST00000343348 IREB2P48200 963 aaKnown RBP12.77□□□□□ -0.36
SEMA6A-202ENST00000343348 PTK7Q13308 1070 aa12.77□□□□□ -0.36
SEMA6A-202ENST00000343348 HEATR4Q86WZ0 1026 aa12.77□□□□□ -0.36
SEMA6A-202ENST00000343348 HORMAD1Q86X24 394 aa12.77□□□□□ -0.36
SEMA6A-202ENST00000343348 OTUB1Q96FW1 271 aaPredicted RBP12.77□□□□□ -0.36
SEMA6A-202ENST00000343348 CAAP1Q9H8G2 361 aa12.77□□□□□ -0.36
SEMA6A-202ENST00000343348 PAIP2BQ9ULR5 123 aaKnown RBP12.77□□□□□ -0.36
SEMA6A-202ENST00000343348 AK9Q5TCS8 1911 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 CLK1P49759 484 aaKnown RBP12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 E4F1Q66K89 784 aaPredicted RBP12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 METTL16Q86W50 562 aaKnown RBP12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 CCDC103Q8IW40 242 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 ZIM3Q96PE6 472 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 CDYLQ9Y232 598 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 ZNF263O14978 683 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 TSC22D2O75157 780 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 AGTP01019 485 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 MYL2P10916 166 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 CPB1P15086 417 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 ZNF200P98182 395 aaPredicted RBP12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 ACSF2Q96CM8 615 aaPredicted RBP12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 BBS2Q9BXC9 721 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 BRD8Q9H0E9 1235 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 SLC40A1Q9NP59 571 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 PVALEFA0A1B0GWK0 134 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 SLC9A1P19634 815 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 BARHL2Q9NY43 387 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
SEMA6A-202ENST00000343348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 DPYSL4O14531 572 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 SRP72O76094 671 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 KCNJ1P48048 391 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 URGCPQ8TCY9 931 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 SPATA33Q96N06 139 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 SATB2Q9UPW6 733 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 DGKHQ86XP1 1220 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 BSDC1Q9NW68 430 aaPredicted RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 CD274Q9NZQ7 290 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 P4HBP07237 508 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 CSE1LP55060 971 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 BYSLQ13895 437 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 C16orf89Q6UX73 402 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 DDX53Q86TM3 631 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 CALR3Q96L12 384 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 PLEKHA5Q9HAU0 1116 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 PEG3Q9GZU2 1588 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 KDM5DQ9BY66 1539 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 M0R3G1 203 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 DLGAP3O95886 979 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 IRF1P10914 325 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 SOAT1P35610 550 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 DCUN1D1Q96GG9 259 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 PRPF18Q99633 342 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 ARHGEF38Q9NXL2 777 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 TPST1O60507 370 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 AKR1B1P15121 316 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 CYP2C19P33261 490 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 AVPR1AP37288 418 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 GALCP54803 685 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 OVGP1Q12889 678 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 GRAPQ13588 217 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 CHI3L2Q15782 390 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 SNX31Q8N9S9 440 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 GRAPLQ8TC17 118 aaPredicted RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 XPO6Q96QU8 1125 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 TMEM245Q9H330 911 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 PKP3Q9Y446 797 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 ADGBQ8N7X0 1667 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 KIAA0556O60303 1618 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 WDR62O43379 1518 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 FAM47DPA6NHR8 397 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 POLRMTO00411 1230 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 GRIN1Q05586 938 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 SYNDIG1Q9H7V2 258 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 PSMC3IPQ9P2W1 217 aaPredicted RBP12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 TJP2Q9UDY2 1190 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 FEM1BQ9UK73 627 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 ZDHHC9Q9Y397 364 aa12.76□□□□□ -0.37
SEMA6A-202ENST00000343348 MYO3BQ8WXR4 1341 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 SMNDC1O75940 238 aaKnown RBP eCLIP12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 HOXA7P31268 230 aaPredicted RBP12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 DUOXA2Q1HG44 320 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 AGGF1Q8N302 714 aaeCLIP12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 MIER2Q8N344 545 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 WRNIP1Q96S55 665 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 SH3GL2Q99962 352 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 CAPN10Q9HC96 672 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 FAM205CA6NFA0 338 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 NBPF26B4DH59 902 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 SLC16A1P53985 500 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 ABCE1P61221 599 aaKnown RBP12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 CCZ1BP86790 482 aa12.75□□□□□ -0.37
SEMA6A-202ENST00000343348 CCZ1P86791 482 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms