RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 VCAM1P19320 739 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 GCKP35557 465 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 PBX1P40424 430 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 SLC12A3P55017 1021 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 SESN2P58004 480 aaPredicted RBP12.67□□□□□ -0.38
CDH5-201ENST00000341529 PPP3CAQ08209 521 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 MAPK7Q13164 816 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 BYSLQ13895 437 aaKnown RBP12.67□□□□□ -0.38
CDH5-201ENST00000341529 SEPT6Q14141 434 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 SIX6OS1Q8N1H7 587 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 BAP1Q92560 729 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 SEC16BQ96JE7 1060 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 FAM81BQ96LP2 452 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 C10orf88Q9H8K7 445 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 TMEM8AQ9HCN3 771 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 PCDHB2Q9Y5E7 798 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 MRPL42Q9Y6G3 142 aaKnown RBP12.67□□□□□ -0.38
CDH5-201ENST00000341529 ESRRAP11474 423 aaPredicted RBP12.66□□□□□ -0.38
CDH5-201ENST00000341529 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
CDH5-201ENST00000341529 SDC4P31431 198 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 CCNA1P78396 465 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 PTGISQ16647 500 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 SLC35G1Q2M3R5 365 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 LPAR1Q92633 364 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 SYN2Q92777 582 aaPredicted RBP12.66□□□□□ -0.38
CDH5-201ENST00000341529 PPP1R36Q96LQ0 422 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 PDCD2LQ9BRP1 358 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 SIK2Q9H0K1 926 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 CARD9Q9H257 536 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 VPS11Q9H270 941 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 IFT122Q9HBG6 1241 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 DIS3Q9Y2L1 958 aaKnown RBP12.66□□□□□ -0.38
CDH5-201ENST00000341529 PEX10O60683 326 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 DDNO94850 711 aaPredicted RBP12.66□□□□□ -0.38
CDH5-201ENST00000341529 CALB1P05937 261 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 PDGFRAP16234 1089 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 COILP38432 576 aaPredicted RBP12.66□□□□□ -0.38
CDH5-201ENST00000341529 DNAJC3Q13217 504 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 LLGL2Q6P1M3 1020 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 CDKL2Q92772 493 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 FAM163AQ96GL9 167 aaPredicted RBP12.66□□□□□ -0.38
CDH5-201ENST00000341529 ZSWIM1Q9BR11 485 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDH5-201ENST00000341529 A8MXQ7 604 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 COPEO14579 308 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 RARBP10826 455 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 OSBPP22059 807 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 EIF3EP60228 445 aaKnown RBP12.66□□□□□ -0.38
CDH5-201ENST00000341529 C4orf50Q6ZRC1 276 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 PRUNE1Q86TP1 453 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 RYBPQ8N488 228 aaPredicted RBP12.66□□□□□ -0.38
CDH5-201ENST00000341529 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 GMCL1Q96IK5 515 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 PARVAQ9NVD7 372 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 IP6K2Q9UHH9 426 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 NEU2Q9Y3R4 380 aa12.66□□□□□ -0.38
CDH5-201ENST00000341529 PYGMP11217 842 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 SLC8A1P32418 973 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 CACNB2Q08289 660 aaPredicted RBP12.65□□□□□ -0.38
CDH5-201ENST00000341529 LRRC34Q8IZ02 419 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 DEPDC1BQ8WUY9 529 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 RAB3IPQ96QF0 476 aaPredicted RBP12.65□□□□□ -0.38
CDH5-201ENST00000341529 TRABDQ9H4I3 376 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 SMYD3Q9H7B4 428 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 RAB6BQ9NRW1 208 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 WNT10BO00744 389 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 CNTN2Q02246 1040 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 HIF1AQ16665 826 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 ARSHQ5FYA8 562 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 ARHGAP24Q8N264 748 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 EXT2Q93063 718 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 UVRAGQ9P2Y5 699 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 ANKRD63C9JTQ0 380 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 TBXAS1P24557 533 aaPredicted RBP12.65□□□□□ -0.38
CDH5-201ENST00000341529 PPM1FP49593 454 aaPredicted RBP12.65□□□□□ -0.38
CDH5-201ENST00000341529 TAF11Q15544 211 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 SEPT1Q8WYJ6 367 aa12.65□□□□□ -0.38
CDH5-201ENST00000341529 PABPN1LA6NDY0 278 aaKnown RBP12.64□□□□□ -0.39
CDH5-201ENST00000341529 TLR2O60603 784 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 GSTA1P08263 222 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 PDHA1P08559 390 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 GSTA2P09210 222 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 EPHB1P54762 984 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 CDK17Q00537 523 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 OVGP1Q12889 678 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 RAPGEF5Q92565 580 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 CCDC124Q96CT7 223 aaKnown RBP12.64□□□□□ -0.39
CDH5-201ENST00000341529 LRRC37BQ96QE4 947 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 ECT2Q9H8V3 914 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
CDH5-201ENST00000341529 PFDN4Q9NQP4 134 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 CYP26B1Q9NR63 512 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 AIPL1Q9NZN9 384 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 KLHL8Q9P2G9 620 aaPredicted RBP12.64□□□□□ -0.39
CDH5-201ENST00000341529 ATP9AO75110 1047 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 RBP3P10745 1247 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 PHKA2P46019 1235 aa12.64□□□□□ -0.39
CDH5-201ENST00000341529 RAP1GAPP47736 663 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms