RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 TOMM70O94826 608 aa18.5■□□□□ 0.55
SYDE2-202ENST00000341460 ATXN3P54252 364 aaPredicted RBP18.5■□□□□ 0.55
SYDE2-202ENST00000341460 RC3H1Q5TC82 1133 aaKnown RBP18.5■□□□□ 0.55
SYDE2-202ENST00000341460 SYDE1Q6ZW31 735 aaPredicted RBP18.5■□□□□ 0.55
SYDE2-202ENST00000341460 EPS8L2Q9H6S3 715 aa18.5■□□□□ 0.55
SYDE2-202ENST00000341460 ZWILCHQ9H900 591 aa18.5■□□□□ 0.55
SYDE2-202ENST00000341460 P4HA2O15460 535 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 LDHAP00338 332 aaKnown RBP18.49■□□□□ 0.55
SYDE2-202ENST00000341460 ANXA13P27216 316 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 GSTT1P30711 240 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 P3H2Q8IVL5 708 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 MDM1Q8TC05 714 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 AGR3Q8TD06 166 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 SEPT1Q8WYJ6 367 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 LCMT1Q9UIC8 334 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 L1RE1Q9UN81 338 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 GOLGA8RI6L899 631 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 FSBPO95073 299 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 RGS2P41220 211 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 JAK3P52333 1124 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 WASHC2DQ5SRD0 308 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 C4orf33Q8N1A6 199 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 RBM12Q9NTZ6 932 aaKnown RBP18.49■□□□□ 0.55
SYDE2-202ENST00000341460 ASNSP08243 561 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 CCT3P49368 545 aaKnown RBP18.49■□□□□ 0.55
SYDE2-202ENST00000341460 MTTPP55157 894 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 FAM83BQ5T0W9 1011 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 SNX19Q92543 992 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 BHMT2Q9H2M3 363 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 CYLDQ9NQC7 956 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 PSMC3IPQ9P2W1 217 aaPredicted RBP18.49■□□□□ 0.55
SYDE2-202ENST00000341460 MARCOQ9UEW3 520 aaPredicted RBP18.49■□□□□ 0.55
SYDE2-202ENST00000341460 DNAJC12Q9UKB3 198 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 ABCA8O94911 1581 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 CFAP99D6REC4 459 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 PSMD14O00487 310 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 FKBP6O75344 327 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 VIL1P09327 827 aaKnown RBP18.49■□□□□ 0.55
SYDE2-202ENST00000341460 SRGAP2CP0DJJ0 459 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 CNGA2Q16280 664 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 CNDP1Q96KN2 507 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 PNKPQ96T60 521 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 ISCUQ9H1K1 167 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 CYP26B1Q9NR63 512 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 SAMD9LQ8IVG5 1584 aa18.49■□□□□ 0.55
SYDE2-202ENST00000341460 SNPHO15079 494 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 PLEKHA8P1O95397 391 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 FAM58BPP0C7Q3 252 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 MCAMP43121 646 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 TRIM71Q2Q1W2 868 aaKnown RBP18.48■□□□□ 0.55
SYDE2-202ENST00000341460 MS4A14Q96JA4 679 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 AIFM3Q96NN9 605 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 ZNF341Q9BYN7 854 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 HPS5Q9UPZ3 1129 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 COPAP53621 1224 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 ARPP19P56211 112 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 TTLL6Q8N841 843 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 RNF139Q8WU17 664 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 LINC00854A0A1B0GVQ3 168 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 KRT16P08779 473 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 SCUBE1Q8IWY4 988 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 ZNF579Q8NAF0 562 aaKnown RBP18.48■□□□□ 0.55
SYDE2-202ENST00000341460 PCYOX1LQ8NBM8 494 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 ZNF507Q8TCN5 953 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 TRIM49BA6NDI0 452 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 ARL13BQ3SXY8 428 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 PCNX4Q63HM2 1172 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 CCDC60Q8IWA6 550 aaPredicted RBP18.48■□□□□ 0.55
SYDE2-202ENST00000341460 TTC8Q8TAM2 541 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 PNMA3Q9UL41 463 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 ZDHHC9Q9Y397 364 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 SNX2O60749 519 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 ARMC3Q5W041 872 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 TRIM51Q9BSJ1 452 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 CEP44Q9C0F1 390 aa18.48■□□□□ 0.55
SYDE2-202ENST00000341460 EML4Q9HC35 981 aaKnown RBP18.48■□□□□ 0.55
SYDE2-202ENST00000341460 TCN1P20061 433 aaPredicted RBP18.47■□□□□ 0.55
SYDE2-202ENST00000341460 PSMA2P25787 234 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 ARMC4Q5T2S8 1044 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 B3GNT6Q6ZMB0 384 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 COL23A1Q86Y22 540 aaPredicted RBP18.47■□□□□ 0.55
SYDE2-202ENST00000341460 PROM2Q8N271 834 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 FHDC1Q9C0D6 1143 aaPredicted RBP18.47■□□□□ 0.55
SYDE2-202ENST00000341460 SPATA2Q9UM82 520 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 STX7O15400 261 aaKnown RBP18.47■□□□□ 0.55
SYDE2-202ENST00000341460 THEMIS2Q5TEJ8 643 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 GOLGA8JA6NMD2 632 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 HIF1AQ16665 826 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 IMPG1Q17R60 797 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 PRUNE1Q86TP1 453 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 OR8H2Q8N162 312 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.47■□□□□ 0.55
SYDE2-202ENST00000341460 ZNF564Q8TBZ8 553 aaPredicted RBP18.47■□□□□ 0.55
SYDE2-202ENST00000341460 CD209Q9NNX6 404 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 POU5F1BQ06416 359 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 TRADDQ15628 312 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 AASDHQ4L235 1098 aaPredicted RBP18.47■□□□□ 0.55
SYDE2-202ENST00000341460 TAS2R42Q7RTR8 314 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 ERICH1Q86X53 443 aa18.47■□□□□ 0.55
SYDE2-202ENST00000341460 NUP93Q8N1F7 819 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms