RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 CAPN9O14815 690 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 CTIFO43310 598 aaKnown RBP12.55□□□□□ -0.4
C2orf88-201ENST00000340623 MED7O43513 233 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 CEP104O60308 925 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 RECQL4O94761 1208 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 ATG7O95352 703 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 RPS6KA1Q15418 735 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 ENOSF1Q7L5Y1 443 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 BRSK2Q8IWQ3 736 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 C11orf70Q9BRQ4 267 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 TRIM10Q9UDY6 481 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 UBQLN1Q9UMX0 589 aaKnown RBP12.55□□□□□ -0.4
C2orf88-201ENST00000340623 FRMD3A2A2Y4 597 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 LPXNO60711 386 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 B3GAT3O94766 335 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 POMCP01189 267 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 RPLP2P05387 115 aaKnown RBP12.55□□□□□ -0.4
C2orf88-201ENST00000340623 ORC1Q13415 861 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 SCYL2Q6P3W7 929 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 ADAT2Q7Z6V5 191 aaKnown RBP12.55□□□□□ -0.4
C2orf88-201ENST00000340623 SEPT8Q92599 483 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 TRIM31Q9BZY9 425 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 NIF3L1Q9GZT8 377 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 ST3GAL5Q9UNP4 418 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 PCDHA2Q9Y5H9 948 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
C2orf88-201ENST00000340623 LRRIQ3A6PVS8 624 aaPredicted RBP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 LACTBL1A8MY62 500 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 P4HA2O15460 535 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 SNX17Q15036 470 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 NAA35Q5VZE5 725 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 OR6B2Q6IFH4 312 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 RBBP8NLQ8NC74 664 aaPredicted RBP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 UNC93B1Q9H1C4 597 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 TNFSF13BQ9Y275 285 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 MYO1FO00160 1098 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 FOXN3O00409 490 aaPredicted RBP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 MOCS3O95396 460 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 CD4P01730 458 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 TUBB4AP04350 444 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 DARSP14868 501 aaKnown RBP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 RFX1P22670 979 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 ADORA2BP29275 332 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 CKAP4Q07065 602 aaKnown RBP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 EHHADHQ08426 723 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 NME8Q8N427 588 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 TRIM58Q8NG06 486 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 HASPINQ8TF76 798 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 GAD1Q99259 594 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 TRPV6Q9H1D0 765 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 INTS13Q9NVM9 706 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 MYO6Q9UM54 1294 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 ADGRA3Q8IWK6 1321 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 GOLGA6L10A0A0M3HER8 536 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 ARHGEF37A1IGU5 675 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 F2P00734 622 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 PLEKP08567 350 aaPredicted RBP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 CRYBB1P53674 252 aaPredicted RBP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 PURAQ00577 322 aaKnown RBP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 SF3A3Q12874 501 aaKnown RBP eCLIP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 MAATS1Q7Z4T9 603 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 KLHL7Q8IXQ5 586 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 DHX38Q92620 1227 aaKnown RBP12.54□□□□□ -0.4
C2orf88-201ENST00000340623 TATDN2Q93075 761 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 MED15Q96RN5 788 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 ADAM22Q9P0K1 906 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 AMFRQ9UKV5 643 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 PCDHB7Q9Y5E2 793 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 SAR1BQ9Y6B6 198 aa12.54□□□□□ -0.4
C2orf88-201ENST00000340623 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 VAV2P52735 878 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 ZBTB41Q5SVQ8 909 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 ERICH1Q86X53 443 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 TMEM35BQ8NCS4 154 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.53□□□□□ -0.4
C2orf88-201ENST00000340623 MICAL1Q8TDZ2 1067 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 RABGGTAQ92696 567 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
C2orf88-201ENST00000340623 CASTOR2A6NHX0 329 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 M0QYV0 167 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 TADA2AO75478 443 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 HSPA6P17066 643 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 CLCN6P51797 869 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 MAP9Q49MG5 647 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 DNAJC24Q6P3W2 148 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 RAD9BQ6WBX8 426 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 ZNF354CQ86Y25 554 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 WDR49Q8IV35 697 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 SCN4BQ8IWT1 228 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 FAM49BQ9NUQ9 324 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 SLC38A7Q9NVC3 462 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 ADGRG1Q9Y653 693 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 PAPPA2Q9BXP8 1791 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 GOLGA6L10A6NI86 522 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 FTCDO95954 541 aa12.53□□□□□ -0.4
C2orf88-201ENST00000340623 PSMD6Q15008 389 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms