RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 HASPINQ8TF76 798 aa13.94□□□□□ -0.18
SRSF3-201ENST00000339436 DDX27Q96GQ7 796 aaKnown RBP13.94□□□□□ -0.18
SRSF3-201ENST00000339436 TCF25Q9BQ70 676 aa13.94□□□□□ -0.18
SRSF3-201ENST00000339436 NSUN3Q9H649 340 aaKnown RBP13.94□□□□□ -0.18
SRSF3-201ENST00000339436 DMAC2Q9NW81 257 aa13.94□□□□□ -0.18
SRSF3-201ENST00000339436 PCDHGC5Q9Y5F6 944 aa13.94□□□□□ -0.18
SRSF3-201ENST00000339436 VCANP13611 3396 aa13.94□□□□□ -0.18
SRSF3-201ENST00000339436 A0A0C4DFX4 3053 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 EXOC3O60645 756 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 B3GAT3O94766 335 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 LRPAP1P30533 357 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 RPL9P32969 192 aaKnown RBP13.93□□□□□ -0.18
SRSF3-201ENST00000339436 MCM4P33991 863 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 GUCY2FP51841 1108 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 ERVFC1P60507 584 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 STIM1Q13586 685 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 SPATA1Q5VX52 437 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 ISM2Q6H9L7 571 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 PDE12Q6L8Q7 609 aaKnown RBP13.93□□□□□ -0.18
SRSF3-201ENST00000339436 TMEM130Q8N3G9 435 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 BEST2Q8NFU1 509 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 MAFAQ8NHW3 353 aaPredicted RBP13.93□□□□□ -0.18
SRSF3-201ENST00000339436 HERC2P3Q9BVR0 1158 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 PDE11AQ9HCR9 933 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 ENTPD7Q9NQZ7 604 aa13.93□□□□□ -0.18
SRSF3-201ENST00000339436 PSMA7O14818 248 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 SOD2P04179 222 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 CTSAP10619 480 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
SRSF3-201ENST00000339436 NR2F2P24468 414 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 PPP1R2P41236 205 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 CYP24A1Q07973 514 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 EDRF1Q3B7T1 1238 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 PLPP4Q5VZY2 271 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 CENPPQ6IPU0 288 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 DCLRE1AQ6PJP8 1040 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 CD300LGQ6UXG3 332 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 GPR62Q9BZJ7 368 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 NGRNQ9NPE2 291 aaKnown RBP13.92□□□□□ -0.18
SRSF3-201ENST00000339436 PTPRJQ12913 1337 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 NCOR1O75376 2440 aa13.92□□□□□ -0.18
SRSF3-201ENST00000339436 TADA2AO75478 443 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 URODP06132 367 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 IGFBP6P24592 240 aaPredicted RBP13.91□□□□□ -0.18
SRSF3-201ENST00000339436 CASP4P49662 377 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 PMS1P54277 932 aaKnown RBP13.91□□□□□ -0.18
SRSF3-201ENST00000339436 LRRC63Q05C16 580 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 ELAVL2Q12926 359 aaKnown RBP13.91□□□□□ -0.18
SRSF3-201ENST00000339436 SMC1AQ14683 1233 aaKnown RBP13.91□□□□□ -0.18
SRSF3-201ENST00000339436 PSMD6Q15008 389 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 SURF1Q15526 300 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 TCEAL5Q5H9L2 206 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 TMC7Q7Z402 723 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 ADGRD2Q7Z7M1 963 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 RDH13Q8NBN7 331 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 IRAK3Q9Y616 596 aa13.91□□□□□ -0.18
SRSF3-201ENST00000339436 TRIM49BA6NDI0 452 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 HIDE1A8MVS5 230 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 PPP1R3GB7ZBB8 358 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 RPL13P26373 211 aaKnown RBP13.9□□□□□ -0.18
SRSF3-201ENST00000339436 GLUD2P49448 558 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 TFAMQ00059 246 aaKnown RBP13.9□□□□□ -0.18
SRSF3-201ENST00000339436 PTPN14Q15678 1187 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 CEP135Q66GS9 1140 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 RBM43Q6ZSC3 357 aaKnown RBP13.9□□□□□ -0.18
SRSF3-201ENST00000339436 WDR49Q8IV35 697 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 ZC3H3Q8IXZ2 948 aaKnown RBP13.9□□□□□ -0.18
SRSF3-201ENST00000339436 MICAL1Q8TDZ2 1067 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 PPP2R3CQ969Q6 453 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 DHTKD1Q96HY7 919 aaPredicted RBP13.9□□□□□ -0.18
SRSF3-201ENST00000339436 FAM84AQ96KN4 292 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 MFSD14AQ96MC6 490 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 TSG101Q99816 390 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 MTMR12Q9C0I1 747 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.18
SRSF3-201ENST00000339436 CHST7Q9NS84 486 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 DPP3Q9NY33 737 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
SRSF3-201ENST00000339436 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.9□□□□□ -0.19
SRSF3-201ENST00000339436 ANO9A1A5B4 782 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 C2orf71A6NGG8 1288 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 PPEF2O14830 753 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 MAPK13O15264 365 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 AKAP3O75969 853 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 TMEM191BP0C7N4 346 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.19
SRSF3-201ENST00000339436 CCNE1P24864 410 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 AARSP49588 968 aaKnown RBP eCLIP13.9□□□□□ -0.19
SRSF3-201ENST00000339436 DSG1Q02413 1049 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 BMS1Q14692 1282 aaKnown RBP13.9□□□□□ -0.19
SRSF3-201ENST00000339436 CCDC85BQ15834 202 aaPredicted RBP13.9□□□□□ -0.19
SRSF3-201ENST00000339436 USP41Q3LFD5 358 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 FAM171A1Q5VUB5 890 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 C9orf57Q5W0N0 161 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 LMBRD2Q68DH5 695 aaPredicted RBP13.9□□□□□ -0.19
SRSF3-201ENST00000339436 KLHL10Q6JEL2 608 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 FOXR2Q6PJQ5 311 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.9□□□□□ -0.19
SRSF3-201ENST00000339436 TAS1R1Q7RTX1 841 aa13.9□□□□□ -0.19
SRSF3-201ENST00000339436 MRPL43Q8N983 215 aaKnown RBP13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms