RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 CLEC16AQ2KHT3 1053 aa17.54■□□□□ 0.4
TRIM9-202ENST00000338969 DPH6Q7L8W6 267 aa17.54■□□□□ 0.4
TRIM9-202ENST00000338969 ZNF516Q92618 1163 aa17.54■□□□□ 0.4
TRIM9-202ENST00000338969 PLVAPQ9BX97 442 aa17.54■□□□□ 0.4
TRIM9-202ENST00000338969 CNOT7Q9UIV1 285 aaKnown RBP17.54■□□□□ 0.4
TRIM9-202ENST00000338969 COL11A2P13942 1736 aaPredicted RBP17.53■□□□□ 0.4
TRIM9-202ENST00000338969 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
TRIM9-202ENST00000338969 UBOX5O94941 541 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 STX2P32856 288 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 PCNX4Q63HM2 1172 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 TAOK1Q7L7X3 1001 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 GPD1LQ8N335 351 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 CD101Q93033 1021 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 IFT74Q96LB3 600 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 IWS1Q96ST2 819 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 TARS2Q9BW92 718 aaKnown RBP17.53■□□□□ 0.4
TRIM9-202ENST00000338969 PICK1Q9NRD5 415 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 AAASQ9NRG9 546 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 TRIM33Q9UPN9 1127 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 ZNF148Q9UQR1 794 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 PCDHA10Q9Y5I2 948 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 CENPFP49454 3210 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 POLGP54098 1239 aaPredicted RBP17.53■□□□□ 0.4
TRIM9-202ENST00000338969 CNGA2Q16280 664 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 CCDC60Q8IWA6 550 aaPredicted RBP17.53■□□□□ 0.4
TRIM9-202ENST00000338969 SUGP1Q8IWZ8 645 aaKnown RBP17.53■□□□□ 0.4
TRIM9-202ENST00000338969 MCOLN2Q8IZK6 566 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 ART4Q93070 314 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 PGM2Q96G03 612 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 ZNF317Q96PQ6 595 aaPredicted RBP17.53■□□□□ 0.4
TRIM9-202ENST00000338969 PXMP2Q9NR77 195 aa17.53■□□□□ 0.4
TRIM9-202ENST00000338969 BANF1O75531 89 aa17.52■□□□□ 0.4
TRIM9-202ENST00000338969 PRKCEQ02156 737 aa17.52■□□□□ 0.4
TRIM9-202ENST00000338969 IZUMO3Q5VZ72 239 aa17.52■□□□□ 0.4
TRIM9-202ENST00000338969 GLIS1Q8NBF1 620 aa17.52■□□□□ 0.4
TRIM9-202ENST00000338969 TACO1Q9BSH4 297 aaKnown RBP17.52■□□□□ 0.4
TRIM9-202ENST00000338969 ALCAMQ13740 583 aa17.52■□□□□ 0.4
TRIM9-202ENST00000338969 DALRD3Q5D0E6 543 aaKnown RBP17.52■□□□□ 0.4
TRIM9-202ENST00000338969 PSPC1Q8WXF1 523 aaKnown RBP17.52■□□□□ 0.4
TRIM9-202ENST00000338969 CCT6BQ92526 530 aa17.52■□□□□ 0.4
TRIM9-202ENST00000338969 ACTR5Q9H9F9 607 aaPredicted RBP17.52■□□□□ 0.4
TRIM9-202ENST00000338969 HOMER3Q9NSC5 361 aa17.52■□□□□ 0.4
TRIM9-202ENST00000338969 UVRAGQ9P2Y5 699 aa17.52■□□□□ 0.4
TRIM9-202ENST00000338969 LOC102724159A0A0B4J2E5 919 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 EIF4E1BA6NMX2 242 aaKnown RBP17.52■□□□□ 0.39
TRIM9-202ENST00000338969 P4HA2O15460 535 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 CETPP11597 493 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 DSG3P32926 999 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 MPP2Q14168 576 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 PWP2Q15269 919 aaKnown RBP17.52■□□□□ 0.39
TRIM9-202ENST00000338969 ANKS1BQ7Z6G8 1248 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 MAP4K3Q8IVH8 894 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 C4orf19Q8IY42 314 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 SAYSD1Q9NPB0 183 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 PNMA3Q9UL41 463 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 PTPRJQ12913 1337 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 MROH7Q68CQ1 1323 aa17.52■□□□□ 0.39
TRIM9-202ENST00000338969 TLR3O15455 904 aaKnown RBP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 KCNA3P22001 575 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 MAP2K2P36507 400 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 ORC1Q13415 861 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 DDX1Q92499 740 aaKnown RBP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 SNF8Q96H20 258 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 CAMKK2Q96RR4 588 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 MOV10L1Q9BXT6 1211 aaKnown RBP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 VPS37BQ9H9H4 285 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 KIF9Q9HAQ2 790 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 SAE1Q9UBE0 346 aaPredicted RBP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 GREB1LQ9C091 1923 aaPredicted RBP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 NCKAP1LP55160 1127 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 RPL7AP62424 266 aaKnown RBP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 TMEM132AQ24JP5 1023 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 ANGEL2Q5VTE6 544 aaKnown RBP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 YTHDF3Q7Z739 585 aaKnown RBP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 C4orf33Q8N1A6 199 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 TMEM130Q8N3G9 435 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 NSRP1Q9H0G5 558 aaKnown RBP17.51■□□□□ 0.39
TRIM9-202ENST00000338969 AGAP1Q9UPQ3 857 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
TRIM9-202ENST00000338969 GNA15P30679 374 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 KCNJ2P63252 427 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 KRT76Q01546 638 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 P3H1Q32P28 736 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 TRPM8Q7Z2W7 1104 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 DCLK3Q9C098 648 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
TRIM9-202ENST00000338969 SLC38A10Q9HBR0 1119 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 XPNPEP1Q9NQW7 623 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRIM9-202ENST00000338969 NINJ2Q9NZG7 142 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 L3MBTL1Q9Y468 752 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 WDR91A4D1P6 747 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 RASSF9O75901 435 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 MARK3P27448 753 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 STRN3Q13033 797 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 TDRD10Q5VZ19 366 aaKnown RBP17.5■□□□□ 0.39
TRIM9-202ENST00000338969 SPOCK2Q92563 424 aa17.5■□□□□ 0.39
TRIM9-202ENST00000338969 PRCCQ92733 491 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms