RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 KRT16P08779 473 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 STAT1P42224 750 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 NPTX2P47972 431 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 COPS2P61201 443 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 SP2Q02086 613 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 CAPRIN2Q6IMN6 1127 aaKnown RBP20.04■□□□□ 0.8
PSPC1-201ENST00000338910 MIS18BP1Q6P0N0 1132 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 XXYLT1Q8NBI6 393 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 CHST13Q8NET6 341 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 STMN4Q9H169 189 aaPredicted RBP20.04■□□□□ 0.8
PSPC1-201ENST00000338910 EMSYQ7Z589 1322 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 IGSF9BQ9UPX0 1349 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 LRRN2O75325 713 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 PSAPP07602 524 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 VAMP7P51809 220 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 NCKAP1LP55160 1127 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 ACTR2P61160 394 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 AUHQ13825 339 aaKnown RBP20.04■□□□□ 0.8
PSPC1-201ENST00000338910 CCDC60Q8IWA6 550 aaPredicted RBP20.04■□□□□ 0.8
PSPC1-201ENST00000338910 ATP6V0A1Q93050 837 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 KLHL29Q96CT2 875 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 STK33Q9BYT3 514 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.04■□□□□ 0.8
PSPC1-201ENST00000338910 RASAL2Q9UJF2 1139 aa20.04■□□□□ 0.8
PSPC1-201ENST00000338910 SPDYE5A6NIY4 337 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 A8MUI8 341 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 SPATA31C2B4DYI2 1134 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 EVI5O60447 810 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 TMEM253P0C7T8 217 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 FERP16591 822 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 PTGIRP43119 386 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 SLCO1A2P46721 670 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 GCLMP48507 274 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 PPP3CAQ08209 521 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 DMP1Q13316 513 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-201ENST00000338910 ARHGAP44Q17R89 818 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 GNPTABQ3T906 1256 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 INTS8Q75QN2 995 aaKnown RBP20.03■□□□□ 0.8
PSPC1-201ENST00000338910 ERICH1Q86X53 443 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 TMEM161BQ8NDZ6 487 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 BSNDQ8WZ55 320 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 ST6GALNAC4Q9H4F1 302 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 TBX20Q9UMR3 447 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 GLTPD2A6NH11 291 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 ANKRD63C9JTQ0 380 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 LIN7AO14910 233 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-201ENST00000338910 STBD1O95210 358 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 CDC25CP30307 473 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 SOX5P35711 763 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 ZNF211Q13398 564 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-201ENST00000338910 MKRN4PQ13434 485 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-201ENST00000338910 GPR162Q16538 588 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 MFSD5Q6N075 450 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 PHLDB3Q6NSJ2 640 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 ASRGL1Q7L266 308 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 TAOK1Q7L7X3 1001 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 UHMK1Q8TAS1 419 aaKnown RBP20.03■□□□□ 0.8
PSPC1-201ENST00000338910 ALG3Q92685 438 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 CDHR1Q96JP9 859 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 SPATC1LQ9H0A9 340 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 ASCC2Q9H1I8 757 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-201ENST00000338910 FGFR1OP2Q9NVK5 253 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 APEX2Q9UBZ4 518 aa20.03■□□□□ 0.8
PSPC1-201ENST00000338910 SEPT9Q9UHD8 586 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-201ENST00000338910 CORO1CQ9ULV4 474 aaPredicted RBP20.03■□□□□ 0.8
PSPC1-201ENST00000338910 FAM170AA1A519 330 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 DENND3A2RUS2 1198 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 RASGRF2O14827 1237 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 RIPK2O43353 540 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 SUN1O94901 812 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 RPL21P46778 160 aaKnown RBP20.02■□□□□ 0.8
PSPC1-201ENST00000338910 CCNG1P51959 295 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 CYFIP1Q7L576 1253 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 NCAPG2Q86XI2 1143 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 KIF2BQ8N4N8 673 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 C18orf8Q96DM3 657 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 DOCK5Q9H7D0 1870 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 KIF9Q9HAQ2 790 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 KMT5AQ9NQR1 393 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 KCNG1Q9UIX4 513 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 LCTP09848 1927 aa20.02■□□□□ 0.8
PSPC1-201ENST00000338910 CXCL11O14625 94 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 GBP1P32455 592 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 MSH2P43246 934 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 STXBP2Q15833 593 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 SEPT14Q6ZU15 432 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 EXOC3L1Q86VI1 746 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 RIOX2Q8IUF8 465 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 LMO3Q8TAP4 145 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 PLEKHO2Q8TD55 490 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 OPTNQ96CV9 577 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 IWS1Q96ST2 819 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 R3HDMLQ9H3Y0 253 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.02■□□□□ 0.799e-7■■■■■ 78
PSPC1-201ENST00000338910 PCDHA3Q9Y5H8 950 aa20.02■□□□□ 0.79
PSPC1-201ENST00000338910 TCP11X1B4DZS4 312 aa20.01■□□□□ 0.79
PSPC1-201ENST00000338910 PHF2O75151 1096 aa20.01■□□□□ 0.79
PSPC1-201ENST00000338910 GJB6O95452 261 aa20.01■□□□□ 0.79
PSPC1-201ENST00000338910 FGFR4P22455 802 aa20.01■□□□□ 0.79
PSPC1-201ENST00000338910 ADSSP30520 456 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms