RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 CXCL16Q9H2A7 254 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 KIAA1586Q9HCI6 787 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CHST7Q9NS84 486 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 DZANK1Q9NVP4 752 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CGNQ9P2M7 1197 aaKnown RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 DERAQ9Y315 318 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 HCFC2Q9Y5Z7 792 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CACNA1AO00555 2505 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 F8W810 466 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CITO14578 2027 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 EXTL3O43909 919 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 FAM189A1O60320 539 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 LILRB3O75022 631 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 TBX10O75333 385 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 ADRB2P07550 413 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CNPP09543 421 aaKnown RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 PAX3P23760 479 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CASP1P29466 404 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 ADSSP30520 456 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 TCHHQ07283 1943 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 SMAD4Q13485 552 aaKnown RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 TMEM132DQ14C87 1099 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CLUL1Q15846 466 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CES5AQ6NT32 575 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 TAS1R1Q7RTX1 841 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 NT5DC4Q86YG4 428 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 NOC3LQ8WTT2 800 aaKnown RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 HPS3Q969F9 1004 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 C18orf25Q96B23 403 aaPredicted RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 FAM213AQ9BRX8 229 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 GOLGA2P5Q9HBQ8 144 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 RXFP1Q9HBX9 757 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 SLC39A2Q9NP94 309 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 FNIP2Q9P278 1114 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CACNG4Q9UBN1 327 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 BARX2Q9UMQ3 279 aaPredicted RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 GRXCR2A6NFK2 248 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 ZNF233A6NK53 670 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 TISP43B9A030 160 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 GLP2RO95838 553 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 EFEMP2O95967 443 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 C1RP00736 705 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 RPN1P04843 607 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 LRPAP1P30533 357 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 SOX4Q06945 474 aaPredicted RBP12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 SPAG1Q07617 926 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 DLX2Q07687 328 aaPredicted RBP12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 EHHADHQ08426 723 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 SURF1Q15526 300 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 ZBTB6Q15916 424 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 KMT5BQ4FZB7 885 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 ZBTB41Q5SVQ8 909 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 ANKRD54Q6NXT1 300 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 EPM2AIP1Q7L775 607 aaPredicted RBP12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 GPD1LQ8N335 351 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 CACTINQ8WUQ7 758 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 PIK3R5Q8WYR1 880 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 MSLNLQ96KJ4 702 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 FGFBP2Q9BYJ0 223 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 RBAKQ9NYW8 714 aaPredicted RBP12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 CLEC1BQ9P126 229 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 R3HCC1Q9Y3T6 440 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 C2CD2Q9Y426 696 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 BRWD1Q9NSI6 2320 aa12.29□□□□□ -0.44
SLC28A1-202ENST00000338602 ARHGEF37A1IGU5 675 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 H7C4K7 107 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 SYN3O14994 580 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 TEX28O15482 410 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 MBTPS2O43462 519 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 GLUD1P00367 558 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 MCM4P33991 863 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 FAM160A1Q05DH4 1040 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 ITIH3Q06033 890 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 KCNC3Q14003 757 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 PSMD5Q16401 504 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 KNOP1Q1ED39 458 aaKnown RBP12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 BMT2Q1RMZ1 405 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 SPATA1Q5VX52 437 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 JADE1Q6IE81 842 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 ANKS3Q6ZW76 656 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 BRSK2Q8IWQ3 736 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 NELFCDQ8IXH7 590 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 SMRP1Q8NCR6 262 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 GLIS3Q8NEA6 775 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 APPL2Q8NEU8 664 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 SLC22A17Q8WUG5 538 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 HDAC7Q8WUI4 952 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 SCFD1Q8WVM8 642 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 SAAL1Q96ER3 474 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 FBXL18Q96ME1 805 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 POP1Q99575 1024 aaKnown RBP12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 CBWD1Q9BRT8 395 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 IKZF4Q9H2S9 585 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 GOLPH3LQ9H4A5 285 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 PCIF1Q9H4Z3 704 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 RMND1Q9NWS8 449 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 PRKAG3Q9UGI9 489 aa12.28□□□□□ -0.44
SLC28A1-202ENST00000338602 TUBGCP4Q9UGJ1 667 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms