RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SRGAP2BP0DMP2 458 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 KLRC2P26717 231 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 FAM171A1Q5VUB5 890 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 ADALQ6DHV7 355 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 PRSS55Q6UWB4 352 aaPredicted RBP16.63■□□□□ 0.25
PRKN-201ENST00000338468 PPFIBP1Q86W92 1011 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 C12orf76Q8N812 135 aaPredicted RBP16.63■□□□□ 0.25
PRKN-201ENST00000338468 PHOX2BQ99453 314 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 MSTO1Q9BUK6 570 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 SLC38A7Q9NVC3 462 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 TUBGCP4Q9UGJ1 667 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 HPSEQ9Y251 543 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 SSX2IPQ9Y2D8 614 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 I3L4J1 428 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 PODXLO00592 558 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 PFKFB1P16118 471 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 RPL17P18621 184 aaKnown RBP16.62■□□□□ 0.25
PRKN-201ENST00000338468 FGFR3P22607 806 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 CMA1P23946 247 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 HOXD13P35453 343 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 BRCC3P46736 316 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 EHHADHQ08426 723 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 KYAT1Q16773 422 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 KIAA1841Q6NSI8 718 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 CRELD2Q6UXH1 353 aaPredicted RBP16.62■□□□□ 0.25
PRKN-201ENST00000338468 CCDC65Q8IXS2 484 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 GRAMD1CQ8IYS0 662 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 TMEM87AQ8NBN3 555 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 ZSWIM2Q8NEG5 633 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 LNX1Q8TBB1 728 aaPredicted RBP16.62■□□□□ 0.25
PRKN-201ENST00000338468 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 DDX27Q96GQ7 796 aaKnown RBP16.62■□□□□ 0.25
PRKN-201ENST00000338468 ACCSQ96QU6 501 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 TTPALQ9BTX7 342 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 LRRC27Q9C0I9 530 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 BLZF1Q9H2G9 400 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 MAGEF1Q9HAY2 307 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 FNIP2Q9P278 1114 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 SERTAD1Q9UHV2 236 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 PCDHB13Q9Y5F0 798 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 USP34Q70CQ2 3546 aa16.62■□□□□ 0.25
PRKN-201ENST00000338468 FAM237AA0A1B0GTK4 181 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 A0A1B0GVL5 298 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 ADAM12O43184 909 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 PRPF6O94906 941 aaKnown RBP16.61■□□□□ 0.25
PRKN-201ENST00000338468 RPL9P32969 192 aaKnown RBP16.61■□□□□ 0.25
PRKN-201ENST00000338468 ACOT2P49753 483 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 ASIC1P78348 528 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 AMPD3Q01432 767 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 ELAVL2Q12926 359 aaKnown RBP16.61■□□□□ 0.25
PRKN-201ENST00000338468 CUL4BQ13620 913 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 ALCAMQ13740 583 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 TPRNQ4KMQ1 711 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 RARS2Q5T160 578 aaKnown RBP16.61■□□□□ 0.25
PRKN-201ENST00000338468 SLFN12LQ6IEE8 588 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 LILRA6Q6PI73 481 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.61■□□□□ 0.25
PRKN-201ENST00000338468 CEP57Q86XR8 500 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 CLSTN3Q9BQT9 956 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 ADAM7Q9H2U9 754 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 RPF1Q9H9Y2 349 aaKnown RBP16.61■□□□□ 0.25
PRKN-201ENST00000338468 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRKN-201ENST00000338468 DZANK1Q9NVP4 752 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 AGO2Q9UKV8 859 aaKnown RBP16.61■□□□□ 0.25
PRKN-201ENST00000338468 ANK1P16157 1881 aa16.61■□□□□ 0.25
PRKN-201ENST00000338468 LOC730098B7Z3J9 87 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 ADH1AP07327 375 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 WEE2P0C1S8 567 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 SLFN14P0C7P3 912 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 TKTP29401 623 aaKnown RBP16.6■□□□□ 0.25
PRKN-201ENST00000338468 AFMP43652 599 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 GUCY2FP51841 1108 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 ZXDAP98168 799 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 PPP2R3AQ06190 1150 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 IER5LQ5T953 404 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 UNC13DQ70J99 1090 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 EPM2AIP1Q7L775 607 aaPredicted RBP16.6■□□□□ 0.25
PRKN-201ENST00000338468 GLYCTKQ8IVS8 523 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 FBXL6Q8N531 539 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 SCAND2PQ9GZW5 306 aaPredicted RBP16.6■□□□□ 0.25
PRKN-201ENST00000338468 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 MAN1C1Q9NR34 630 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 EXOC7Q9UPT5 735 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 ATP6V1DQ9Y5K8 247 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
PRKN-201ENST00000338468 TGM5O43548 720 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 GLUD1P00367 558 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 NFICP08651 508 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 SPATA31D3P0C874 917 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 CYP3A5P20815 502 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 LRPAP1P30533 357 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 NDUFA8P51970 172 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 WNT7BP56706 349 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 ITIH3Q06033 890 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 CBX2Q14781 532 aaPredicted RBP16.59■□□□□ 0.25
PRKN-201ENST00000338468 PSMD5Q16401 504 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 JADE1Q6IE81 842 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 RSPO2Q6UXX9 243 aaPredicted RBP16.59■□□□□ 0.25
PRKN-201ENST00000338468 SPATA31D4Q6ZUB0 917 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms